Protein–RNA interactions for Protein: Q96FF7

MISP3, Uncharacterized protein MISP3, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MISP3Q96FF7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MISP3Q96FF7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.72■□□□□ 0.43
MISP3Q96FF7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.72■□□□□ 0.43
MISP3Q96FF7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.72■□□□□ 0.43
MISP3Q96FF7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MISP3Q96FF7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MISP3Q96FF7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MISP3Q96FF7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MISP3Q96FF7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MISP3Q96FF7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 AL031848.2-201ENST00000607670 837 ntBASIC17.71■□□□□ 0.43
MISP3Q96FF7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MISP3Q96FF7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MISP3Q96FF7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
MISP3Q96FF7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MISP3Q96FF7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MISP3Q96FF7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MISP3Q96FF7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MISP3Q96FF7 EP400NL-214ENST00000641289 2402 ntBASIC17.7■□□□□ 0.42
MISP3Q96FF7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MISP3Q96FF7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MISP3Q96FF7 AC007375.3-201ENST00000600936 2314 ntBASIC17.7■□□□□ 0.42
MISP3Q96FF7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MISP3Q96FF7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.69■□□□□ 0.42
MISP3Q96FF7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MISP3Q96FF7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MISP3Q96FF7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.68■□□□□ 0.42
MISP3Q96FF7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.68■□□□□ 0.42
MISP3Q96FF7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.68■□□□□ 0.42
MISP3Q96FF7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.68■□□□□ 0.42
MISP3Q96FF7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MISP3Q96FF7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MISP3Q96FF7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.67■□□□□ 0.42
MISP3Q96FF7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.67■□□□□ 0.42
MISP3Q96FF7 SNX5-217ENST00000606557 1087 ntBASIC17.67■□□□□ 0.42
MISP3Q96FF7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.67■□□□□ 0.42
MISP3Q96FF7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MISP3Q96FF7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MISP3Q96FF7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.67■□□□□ 0.42
MISP3Q96FF7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MISP3Q96FF7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MISP3Q96FF7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
MISP3Q96FF7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms