Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NMD3Q96D46 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NMD3Q96D46 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NMD3Q96D46 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NMD3Q96D46 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NMD3Q96D46 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NMD3Q96D46 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NMD3Q96D46 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NMD3Q96D46 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NMD3Q96D46 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 C11orf96-202ENST00000528572 1834 ntBASIC20.73■□□□□ 0.91
NMD3Q96D46 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NMD3Q96D46 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NMD3Q96D46 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NMD3Q96D46 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NMD3Q96D46 AL592295.1-201ENST00000400984 884 ntBASIC20.72■□□□□ 0.91
NMD3Q96D46 AC004987.1-201ENST00000428627 508 ntBASIC20.72■□□□□ 0.91
NMD3Q96D46 ATP5G2P3-201ENST00000429083 425 ntBASIC20.72■□□□□ 0.91
NMD3Q96D46 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.72■□□□□ 0.91
NMD3Q96D46 DUX4L18-201ENST00000553347 1267 ntBASIC20.72■□□□□ 0.91
NMD3Q96D46 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NMD3Q96D46 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NMD3Q96D46 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.72■□□□□ 0.91
NMD3Q96D46 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NMD3Q96D46 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NMD3Q96D46 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NMD3Q96D46 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NMD3Q96D46 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NMD3Q96D46 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NMD3Q96D46 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NMD3Q96D46 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NMD3Q96D46 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NMD3Q96D46 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NMD3Q96D46 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.71■□□□□ 0.91
NMD3Q96D46 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NMD3Q96D46 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NMD3Q96D46 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.71■□□□□ 0.91
NMD3Q96D46 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NMD3Q96D46 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NMD3Q96D46 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NMD3Q96D46 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
NMD3Q96D46 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NMD3Q96D46 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NMD3Q96D46 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NMD3Q96D46 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NMD3Q96D46 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.7■□□□□ 0.9
NMD3Q96D46 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.7■□□□□ 0.9
NMD3Q96D46 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.7■□□□□ 0.9
NMD3Q96D46 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NMD3Q96D46 AC019171.1-201ENST00000601251 1056 ntBASIC20.7■□□□□ 0.9
NMD3Q96D46 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NMD3Q96D46 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NMD3Q96D46 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.69■□□□□ 0.9
NMD3Q96D46 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.69■□□□□ 0.9
NMD3Q96D46 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.69■□□□□ 0.9
NMD3Q96D46 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NMD3Q96D46 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NMD3Q96D46 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.69■□□□□ 0.9
NMD3Q96D46 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.69■□□□□ 0.9
NMD3Q96D46 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NMD3Q96D46 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.68■□□□□ 0.9
NMD3Q96D46 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NMD3Q96D46 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NMD3Q96D46 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.68■□□□□ 0.9
NMD3Q96D46 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.68■□□□□ 0.9
NMD3Q96D46 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NMD3Q96D46 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 AC007952.6-201ENST00000573168 2673 ntBASIC20.67■□□□□ 0.9
NMD3Q96D46 AC003957.1-201ENST00000625108 2673 ntBASIC20.67■□□□□ 0.9
NMD3Q96D46 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.67■□□□□ 0.9
NMD3Q96D46 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.67■□□□□ 0.9
NMD3Q96D46 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms