Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM54Q969K7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.49■□□□□ 0.71
TMEM54Q969K7 AL138724.1-201ENST00000606771 1088 ntBASIC19.49■□□□□ 0.71
TMEM54Q969K7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM54Q969K7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM54Q969K7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM54Q969K7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM54Q969K7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM54Q969K7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM54Q969K7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM54Q969K7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM54Q969K7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 AC233723.2-201ENST00000623798 2106 ntBASIC19.48■□□□□ 0.71
TMEM54Q969K7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM54Q969K7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 AC087742.1-201ENST00000575880 1738 ntBASIC19.48■□□□□ 0.71
TMEM54Q969K7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM54Q969K7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM54Q969K7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM54Q969K7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM54Q969K7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM54Q969K7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 AC127496.7-201ENST00000625110 1798 ntBASIC19.47■□□□□ 0.71
TMEM54Q969K7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM54Q969K7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM54Q969K7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM54Q969K7 AC008406.3-201ENST00000620001 1374 ntBASIC19.46■□□□□ 0.71
TMEM54Q969K7 LINC01960-201ENST00000563759 1884 ntBASIC19.46■□□□□ 0.71
TMEM54Q969K7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM54Q969K7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM54Q969K7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM54Q969K7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM54Q969K7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TMEM54Q969K7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 AC011298.3-201ENST00000615796 283 ntBASIC19.45■□□□□ 0.7
TMEM54Q969K7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM54Q969K7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM54Q969K7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM54Q969K7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
TMEM54Q969K7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM54Q969K7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM54Q969K7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM54Q969K7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 OR2I1P-207ENST00000453522 948 ntBASIC19.43■□□□□ 0.7
TMEM54Q969K7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.43■□□□□ 0.7
TMEM54Q969K7 AC136469.2-201ENST00000623944 1028 ntBASIC19.43■□□□□ 0.7
TMEM54Q969K7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM54Q969K7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM54Q969K7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM54Q969K7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM54Q969K7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM54Q969K7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms