Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF3Q92576 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.93■□□□□ 0.78
PHF3Q92576 TSPY26P-201ENST00000476365 1326 ntBASIC19.93■□□□□ 0.78
PHF3Q92576 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PHF3Q92576 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHF3Q92576 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.93■□□□□ 0.78
PHF3Q92576 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PHF3Q92576 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.93■□□□□ 0.78
PHF3Q92576 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PHF3Q92576 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF3Q92576 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PHF3Q92576 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 AC010525.1-201ENST00000585559 441 ntBASIC19.92■□□□□ 0.78
PHF3Q92576 AL358852.1-201ENST00000623174 1268 ntBASIC19.92■□□□□ 0.78
PHF3Q92576 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.92■□□□□ 0.78
PHF3Q92576 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PHF3Q92576 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 IGHV3-19-201ENST00000521488 291 ntBASIC19.92■□□□□ 0.78
PHF3Q92576 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF3Q92576 FP325331.1-202ENST00000623531 1380 ntBASIC19.91■□□□□ 0.78
PHF3Q92576 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.91■□□□□ 0.78
PHF3Q92576 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF3Q92576 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF3Q92576 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF3Q92576 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.91■□□□□ 0.78
PHF3Q92576 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.91■□□□□ 0.78
PHF3Q92576 IKBKGP1-201ENST00000612193 1073 ntBASIC19.91■□□□□ 0.78
PHF3Q92576 AL031602.1-201ENST00000633169 911 ntBASIC19.91■□□□□ 0.78
PHF3Q92576 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF3Q92576 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF3Q92576 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF3Q92576 AC012676.1-201ENST00000574705 1949 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF3Q92576 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF3Q92576 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PHF3Q92576 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.9■□□□□ 0.78
PHF3Q92576 KRT18P5-201ENST00000436075 1291 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.9■□□□□ 0.78
PHF3Q92576 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L2-201ENST00000561772 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L6-201ENST00000626483 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L1-201ENST00000627662 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L8-201ENST00000629013 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L3-201ENST00000630187 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L7-201ENST00000630678 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 DUX4L5-201ENST00000630834 1275 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.9■□□□□ 0.78
PHF3Q92576 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PHF3Q92576 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF3Q92576 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PHF3Q92576 DUSP8P3-201ENST00000399571 1760 ntBASIC19.9■□□□□ 0.78
PHF3Q92576 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHF3Q92576 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHF3Q92576 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.89■□□□□ 0.78
PHF3Q92576 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHF3Q92576 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
PHF3Q92576 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHF3Q92576 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
PHF3Q92576 AC133637.1-201ENST00000624115 1537 ntBASIC19.89■□□□□ 0.78
PHF3Q92576 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PHF3Q92576 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PHF3Q92576 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.89■□□□□ 0.77
PHF3Q92576 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.89■□□□□ 0.77
PHF3Q92576 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PHF3Q92576 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF3Q92576 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.88■□□□□ 0.77
PHF3Q92576 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.88■□□□□ 0.77
PHF3Q92576 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 ANOS2P-203ENST00000472227 1816 ntBASIC19.88■□□□□ 0.77
PHF3Q92576 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHF3Q92576 AC123595.1-201ENST00000440769 1046 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms