Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
TM9SF4Q92544 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF4Q92544 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF4Q92544 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.73■□□□□ 0.91
TM9SF4Q92544 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF4Q92544 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.73■□□□□ 0.91
TM9SF4Q92544 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.73■□□□□ 0.91
TM9SF4Q92544 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF4Q92544 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF4Q92544 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF4Q92544 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF4Q92544 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF4Q92544 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TM9SF4Q92544 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF4Q92544 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF4Q92544 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF4Q92544 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TM9SF4Q92544 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF4Q92544 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF4Q92544 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.71■□□□□ 0.91
TM9SF4Q92544 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF4Q92544 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF4Q92544 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF4Q92544 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF4Q92544 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF4Q92544 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF4Q92544 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF4Q92544 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TM9SF4Q92544 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TM9SF4Q92544 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
TM9SF4Q92544 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.69■□□□□ 0.9
TM9SF4Q92544 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.69■□□□□ 0.9
TM9SF4Q92544 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF4Q92544 AL117328.2-201ENST00000624617 1940 ntBASIC20.68■□□□□ 0.9
TM9SF4Q92544 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF4Q92544 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.68■□□□□ 0.9
TM9SF4Q92544 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF4Q92544 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TM9SF4Q92544 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF4Q92544 AC034268.1-201ENST00000441047 882 ntBASIC20.68■□□□□ 0.9
TM9SF4Q92544 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF4Q92544 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF4Q92544 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF4Q92544 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TM9SF4Q92544 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF4Q92544 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF4Q92544 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF4Q92544 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF4Q92544 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF4Q92544 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TM9SF4Q92544 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF4Q92544 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TM9SF4Q92544 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF4Q92544 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF4Q92544 TSPY26P-201ENST00000476365 1326 ntBASIC20.66■□□□□ 0.9
TM9SF4Q92544 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms