Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 AC008764.7-201ENST00000593779 1081 ntBASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 AL138724.1-201ENST00000606771 1088 ntBASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NKX2-3Q8TAU0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 ID1-201ENST00000376105 1233 ntBASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 SLC47A1P1-202ENST00000449666 945 ntBASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 AC011298.3-201ENST00000615796 283 ntBASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
NKX2-3Q8TAU0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NKX2-3Q8TAU0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 AC099791.1-201ENST00000416440 715 ntBASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 AC010525.1-201ENST00000585559 441 ntBASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 DUSP8P5-201ENST00000422884 1815 ntBASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.23■■□□□ 1.79
NKX2-3Q8TAU0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NKX2-3Q8TAU0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 AC133637.1-201ENST00000624115 1537 ntBASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.21■■□□□ 1.79
NKX2-3Q8TAU0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
NKX2-3Q8TAU0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NKX2-3Q8TAU0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NKX2-3Q8TAU0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.2■■□□□ 1.78
NKX2-3Q8TAU0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 AC004687.1-201ENST00000579003 1625 ntBASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 AC136469.2-201ENST00000623944 1028 ntBASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.19■■□□□ 1.78
NKX2-3Q8TAU0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NKX2-3Q8TAU0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.18■■□□□ 1.78
NKX2-3Q8TAU0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NKX2-3Q8TAU0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.18■■□□□ 1.78
NKX2-3Q8TAU0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
NKX2-3Q8TAU0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
NKX2-3Q8TAU0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.17■■□□□ 1.78
NKX2-3Q8TAU0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NKX2-3Q8TAU0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms