Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNIP1Q8TAD8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.89■□□□□ 0.94
SNIP1Q8TAD8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNIP1Q8TAD8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.88■□□□□ 0.93
SNIP1Q8TAD8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 KRT18P6-201ENST00000555540 1265 ntBASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNIP1Q8TAD8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 AL121832.2-201ENST00000610979 668 ntBASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNIP1Q8TAD8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNIP1Q8TAD8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNIP1Q8TAD8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.85■□□□□ 0.93
SNIP1Q8TAD8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNIP1Q8TAD8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SNIP1Q8TAD8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNIP1Q8TAD8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNIP1Q8TAD8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.84■□□□□ 0.93
SNIP1Q8TAD8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.84■□□□□ 0.93
SNIP1Q8TAD8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.83■□□□□ 0.93
SNIP1Q8TAD8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.83■□□□□ 0.92
SNIP1Q8TAD8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 TSPY6P-201ENST00000448518 926 ntBASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 HLA-L-211ENST00000482052 1765 ntBASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNIP1Q8TAD8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms