Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
SHCBP1Q8NEM2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SHCBP1Q8NEM2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.27■■□□□ 1.64
SHCBP1Q8NEM2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SHCBP1Q8NEM2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.27■■□□□ 1.64
SHCBP1Q8NEM2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.27■■□□□ 1.64
SHCBP1Q8NEM2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHCBP1Q8NEM2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
SHCBP1Q8NEM2 AC080038.1-201ENST00000611274 1154 ntBASIC25.26■■□□□ 1.63
SHCBP1Q8NEM2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SHCBP1Q8NEM2 BX005040.4-201ENST00000637145 1518 ntBASIC25.26■■□□□ 1.63
SHCBP1Q8NEM2 AC079630.1-202ENST00000618127 1840 ntBASIC25.26■■□□□ 1.63
SHCBP1Q8NEM2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.26■■□□□ 1.63
SHCBP1Q8NEM2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHCBP1Q8NEM2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 LINC00543-201ENST00000567234 1845 ntBASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 AC004687.1-201ENST00000579003 1625 ntBASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 AP004607.4-201ENST00000530158 1459 ntBASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SHCBP1Q8NEM2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 AC137761.2-201ENST00000561729 223 ntBASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 AC145350.3-201ENST00000569033 163 ntBASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 AC087239.1-201ENST00000622671 572 ntBASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SHCBP1Q8NEM2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 AC016769.1-201ENST00000409132 1010 ntBASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 AC010141.3-201ENST00000456659 717 ntBASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 RAP2CP1-201ENST00000605103 478 ntBASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.22■■□□□ 1.63
SHCBP1Q8NEM2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 SMUG1P1-201ENST00000590640 811 ntBASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SHCBP1Q8NEM2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.2■■□□□ 1.62
SHCBP1Q8NEM2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms