Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC38A9Q8NBW4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC38A9Q8NBW4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC38A9Q8NBW4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC38A9Q8NBW4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.94
SLC38A9Q8NBW4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SLC38A9Q8NBW4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 AC123595.1-201ENST00000440769 1046 ntBASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC38A9Q8NBW4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A9Q8NBW4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC38A9Q8NBW4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 KRT18P5-201ENST00000436075 1291 ntBASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A9Q8NBW4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 CCDC92B-201ENST00000575506 885 ntBASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 AC105233.4-201ENST00000642045 216 ntBASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC38A9Q8NBW4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC38A9Q8NBW4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC38A9Q8NBW4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC38A9Q8NBW4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC38A9Q8NBW4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC38A9Q8NBW4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC38A9Q8NBW4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms