Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2BBQ8N257 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 AL031258.1-201ENST00000623562 325 ntBASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 LINC00273-201ENST00000539813 1452 ntBASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HIST3H2BBQ8N257 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST3H2BBQ8N257 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST3H2BBQ8N257 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HIST3H2BBQ8N257 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST3H2BBQ8N257 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIST3H2BBQ8N257 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms