Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 AC105233.4-201ENST00000642045 216 ntBASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ARHGEF28Q8N1W1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.02■■■□□ 2.56
ARHGEF28Q8N1W1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
ARHGEF28Q8N1W1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.02■■■□□ 2.56
ARHGEF28Q8N1W1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.02■■■□□ 2.56
ARHGEF28Q8N1W1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.02■■■□□ 2.56
ARHGEF28Q8N1W1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ARHGEF28Q8N1W1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ARHGEF28Q8N1W1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ARHGEF28Q8N1W1 AL137784.2-201ENST00000607332 1000 ntBASIC31.01■■■□□ 2.56
ARHGEF28Q8N1W1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ARHGEF28Q8N1W1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ARHGEF28Q8N1W1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ARHGEF28Q8N1W1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
ARHGEF28Q8N1W1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
ARHGEF28Q8N1W1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
ARHGEF28Q8N1W1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC31■■■□□ 2.55
ARHGEF28Q8N1W1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31■■■□□ 2.55
ARHGEF28Q8N1W1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31■■■□□ 2.55
ARHGEF28Q8N1W1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
ARHGEF28Q8N1W1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.98■■■□□ 2.55
ARHGEF28Q8N1W1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ARHGEF28Q8N1W1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ARHGEF28Q8N1W1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ARHGEF28Q8N1W1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.97■■■□□ 2.55
ARHGEF28Q8N1W1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ARHGEF28Q8N1W1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ARHGEF28Q8N1W1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.96■■■□□ 2.55
ARHGEF28Q8N1W1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ARHGEF28Q8N1W1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
ARHGEF28Q8N1W1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ARHGEF28Q8N1W1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.95■■■□□ 2.55
ARHGEF28Q8N1W1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ARHGEF28Q8N1W1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.95■■■□□ 2.55
ARHGEF28Q8N1W1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ARHGEF28Q8N1W1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.54
ARHGEF28Q8N1W1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.95■■■□□ 2.54
ARHGEF28Q8N1W1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
ARHGEF28Q8N1W1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
ARHGEF28Q8N1W1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ARHGEF28Q8N1W1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 AL353803.4-201ENST00000565882 1934 ntBASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
ARHGEF28Q8N1W1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.92■■■□□ 2.54
ARHGEF28Q8N1W1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
ARHGEF28Q8N1W1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.92■■■□□ 2.54
ARHGEF28Q8N1W1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.92■■■□□ 2.54
ARHGEF28Q8N1W1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
ARHGEF28Q8N1W1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
ARHGEF28Q8N1W1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms