Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.79■■□□□ 1.08
CPNE9Q8IYJ1 AL117328.2-201ENST00000624617 1940 ntBASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE9Q8IYJ1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE9Q8IYJ1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 GUSBP5-202ENST00000510805 1989 ntBASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 AC004687.1-201ENST00000579003 1625 ntBASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE9Q8IYJ1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 AL512631.2-201ENST00000604634 923 ntBASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE9Q8IYJ1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 AC006455.2-201ENST00000429931 906 ntBASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 AC241377.3-202ENST00000626088 1088 ntBASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 AC241585.3-202ENST00000628937 1088 ntBASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 AC245100.8-202ENST00000629247 1058 ntBASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CPNE9Q8IYJ1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 AC099791.2-201ENST00000605725 427 ntBASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE9Q8IYJ1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE9Q8IYJ1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE9Q8IYJ1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE9Q8IYJ1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE9Q8IYJ1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms