Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
DHX40Q8IX18 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
DHX40Q8IX18 AC010542.4-201ENST00000563151 1910 ntBASIC24.57■■□□□ 1.52
DHX40Q8IX18 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DHX40Q8IX18 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DHX40Q8IX18 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.56■■□□□ 1.52
DHX40Q8IX18 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.56■■□□□ 1.52
DHX40Q8IX18 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DHX40Q8IX18 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 FAM99A-202ENST00000538190 1989 ntBASIC24.55■■□□□ 1.52
DHX40Q8IX18 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DHX40Q8IX18 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
DHX40Q8IX18 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DHX40Q8IX18 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DHX40Q8IX18 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
DHX40Q8IX18 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DHX40Q8IX18 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DHX40Q8IX18 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.54■■□□□ 1.52
DHX40Q8IX18 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
DHX40Q8IX18 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.54■■□□□ 1.52
DHX40Q8IX18 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.54■■□□□ 1.52
DHX40Q8IX18 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.54■■□□□ 1.52
DHX40Q8IX18 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
DHX40Q8IX18 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.53■■□□□ 1.52
DHX40Q8IX18 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.53■■□□□ 1.52
DHX40Q8IX18 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.53■■□□□ 1.52
DHX40Q8IX18 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.53■■□□□ 1.52
DHX40Q8IX18 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
DHX40Q8IX18 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DHX40Q8IX18 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DHX40Q8IX18 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DHX40Q8IX18 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
DHX40Q8IX18 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.52■■□□□ 1.52
DHX40Q8IX18 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.52■■□□□ 1.52
DHX40Q8IX18 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
DHX40Q8IX18 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.52■■□□□ 1.52
DHX40Q8IX18 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.52■■□□□ 1.52
DHX40Q8IX18 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DHX40Q8IX18 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
DHX40Q8IX18 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DHX40Q8IX18 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DHX40Q8IX18 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DHX40Q8IX18 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DHX40Q8IX18 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DHX40Q8IX18 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.51■■□□□ 1.51
DHX40Q8IX18 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DHX40Q8IX18 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DHX40Q8IX18 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
DHX40Q8IX18 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 AC103834.1-201ENST00000520383 144 ntBASIC24.49■■□□□ 1.51
DHX40Q8IX18 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.49■■□□□ 1.51
DHX40Q8IX18 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
DHX40Q8IX18 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DHX40Q8IX18 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
DHX40Q8IX18 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms