Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC133561.1-201ENST00000568600 2415 ntBASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM48Q8IWZ4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRIM48Q8IWZ4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM48Q8IWZ4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM48Q8IWZ4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRIM48Q8IWZ4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM48Q8IWZ4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.58■■□□□ 1.04
TRIM48Q8IWZ4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.58■■□□□ 1.04
TRIM48Q8IWZ4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM48Q8IWZ4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM48Q8IWZ4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM48Q8IWZ4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM48Q8IWZ4 OR2I1P-207ENST00000453522 948 ntBASIC21.57■■□□□ 1.04
TRIM48Q8IWZ4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM48Q8IWZ4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRIM48Q8IWZ4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRIM48Q8IWZ4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM48Q8IWZ4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 IRS3P-201ENST00000223076 1006 ntBASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 AC010525.1-201ENST00000585559 441 ntBASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 AC004687.1-201ENST00000579003 1625 ntBASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM48Q8IWZ4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 TSPY26P-201ENST00000476365 1326 ntBASIC21.54■■□□□ 1.04
TRIM48Q8IWZ4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 ANOS2P-203ENST00000472227 1816 ntBASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM48Q8IWZ4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRIM48Q8IWZ4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.52■■□□□ 1.03
TRIM48Q8IWZ4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM48Q8IWZ4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM48Q8IWZ4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM48Q8IWZ4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TRIM48Q8IWZ4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM48Q8IWZ4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms