Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.04■■□□□ 1.44
PALB2Q86YC2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.04■■□□□ 1.44
PALB2Q86YC2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.04■■□□□ 1.44
PALB2Q86YC2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.04■■□□□ 1.44
PALB2Q86YC2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.04■■□□□ 1.44
PALB2Q86YC2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PALB2Q86YC2 AC079630.1-202ENST00000618127 1840 ntBASIC24.04■■□□□ 1.44
PALB2Q86YC2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PALB2Q86YC2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
PALB2Q86YC2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 AC097381.1-201ENST00000429019 1296 ntBASIC24.03■■□□□ 1.44
PALB2Q86YC2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PALB2Q86YC2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.03■■□□□ 1.44
PALB2Q86YC2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.03■■□□□ 1.44
PALB2Q86YC2 AC087623.3-201ENST00000607047 1098 ntBASIC24.03■■□□□ 1.44
PALB2Q86YC2 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.03■■□□□ 1.44
PALB2Q86YC2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.03■■□□□ 1.44
PALB2Q86YC2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PALB2Q86YC2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
PALB2Q86YC2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
PALB2Q86YC2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PALB2Q86YC2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.02■■□□□ 1.44
PALB2Q86YC2 C1orf229-201ENST00000623686 2258 ntBASIC24.01■■□□□ 1.43
PALB2Q86YC2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
PALB2Q86YC2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PALB2Q86YC2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PALB2Q86YC2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.01■■□□□ 1.43
PALB2Q86YC2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.01■■□□□ 1.43
PALB2Q86YC2 AC233992.3-201ENST00000607491 485 ntBASIC24.01■■□□□ 1.43
PALB2Q86YC2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PALB2Q86YC2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PALB2Q86YC2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
PALB2Q86YC2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PALB2Q86YC2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
PALB2Q86YC2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24■■□□□ 1.43
PALB2Q86YC2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24■■□□□ 1.43
PALB2Q86YC2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PALB2Q86YC2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24■■□□□ 1.43
PALB2Q86YC2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24■■□□□ 1.43
PALB2Q86YC2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24■■□□□ 1.43
PALB2Q86YC2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24■■□□□ 1.43
PALB2Q86YC2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PALB2Q86YC2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PALB2Q86YC2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PALB2Q86YC2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PALB2Q86YC2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.99■■□□□ 1.43
PALB2Q86YC2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.99■■□□□ 1.43
PALB2Q86YC2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.99■■□□□ 1.43
PALB2Q86YC2 pRNA.6-201ENST00000610482 90 ntBASIC23.99■■□□□ 1.43
PALB2Q86YC2 pRNA.5-201ENST00000612139 90 ntBASIC23.99■■□□□ 1.43
PALB2Q86YC2 pRNA.11-201ENST00000618423 90 ntBASIC23.99■■□□□ 1.43
PALB2Q86YC2 pRNA.13-201ENST00000619112 90 ntBASIC23.99■■□□□ 1.43
PALB2Q86YC2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PALB2Q86YC2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PALB2Q86YC2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.98■■□□□ 1.43
PALB2Q86YC2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.98■■□□□ 1.43
PALB2Q86YC2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.98■■□□□ 1.43
PALB2Q86YC2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PALB2Q86YC2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PALB2Q86YC2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PALB2Q86YC2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.97■■□□□ 1.43
PALB2Q86YC2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PALB2Q86YC2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PALB2Q86YC2 BX842568.3-201ENST00000418104 571 ntBASIC23.97■■□□□ 1.43
PALB2Q86YC2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.97■■□□□ 1.43
PALB2Q86YC2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PALB2Q86YC2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PALB2Q86YC2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PALB2Q86YC2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PALB2Q86YC2 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.96■■□□□ 1.43
PALB2Q86YC2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PALB2Q86YC2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PALB2Q86YC2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PALB2Q86YC2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PALB2Q86YC2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.95■■□□□ 1.43
PALB2Q86YC2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
PALB2Q86YC2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.95■■□□□ 1.43
PALB2Q86YC2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.95■■□□□ 1.43
PALB2Q86YC2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PALB2Q86YC2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PALB2Q86YC2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.95■■□□□ 1.42
PALB2Q86YC2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.95■■□□□ 1.42
PALB2Q86YC2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PALB2Q86YC2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PALB2Q86YC2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms