Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 MIR5787-201ENST00000611784 55 ntBASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.37■■□□□ 1.33
LRRTM3Q86VH5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRTM3Q86VH5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 MIR6084-201ENST00000622012 110 ntBASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
LRRTM3Q86VH5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
LRRTM3Q86VH5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 AC012414.1-201ENST00000556676 535 ntBASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 AL358852.1-201ENST00000623174 1268 ntBASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 AL031602.1-201ENST00000633169 911 ntBASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRRTM3Q86VH5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.33■■□□□ 1.32
LRRTM3Q86VH5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.32■■□□□ 1.32
LRRTM3Q86VH5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRTM3Q86VH5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRTM3Q86VH5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms