Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF546Q86UE3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 AC010542.4-201ENST00000563151 1910 ntBASIC18.29■□□□□ 0.52
ZNF546Q86UE3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF546Q86UE3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF546Q86UE3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF546Q86UE3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZNF546Q86UE3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF546Q86UE3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ZNF546Q86UE3 MIR3648-2-201ENST00000581792 180 ntBASIC18.27■□□□□ 0.52
ZNF546Q86UE3 MIR3648-1-201ENST00000615959 180 ntBASIC18.27■□□□□ 0.52
ZNF546Q86UE3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF546Q86UE3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF546Q86UE3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ZNF546Q86UE3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
ZNF546Q86UE3 LINC01521-201ENST00000504184 1943 ntBASIC18.27■□□□□ 0.51
ZNF546Q86UE3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.27■□□□□ 0.51
ZNF546Q86UE3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF546Q86UE3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF546Q86UE3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ZNF546Q86UE3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 AL157384.1-201ENST00000445995 2473 ntBASIC18.26■□□□□ 0.51
ZNF546Q86UE3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 SMPD5-203ENST00000639008 1464 ntBASIC18.26■□□□□ 0.51
ZNF546Q86UE3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF546Q86UE3 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms