Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 FP325331.1-202ENST00000623531 1380 ntBASIC19.95■□□□□ 0.78
HDDC2Q7Z4H3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDDC2Q7Z4H3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 MIR6724-1-201ENST00000616420 92 ntBASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 MIR6724-2-201ENST00000616483 92 ntBASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 MIR6724-4-201ENST00000617390 92 ntBASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 MIR6724-3-201ENST00000622482 92 ntBASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDDC2Q7Z4H3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDDC2Q7Z4H3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 KRT16P3-201ENST00000439127 1283 ntBASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HDDC2Q7Z4H3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 LINC01529-204ENST00000636474 1715 ntBASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 AL353803.4-201ENST00000565882 1934 ntBASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.9■□□□□ 0.78
HDDC2Q7Z4H3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HDDC2Q7Z4H3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HDDC2Q7Z4H3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 UNC93B8-201ENST00000511903 705 ntBASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
HDDC2Q7Z4H3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDDC2Q7Z4H3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HDDC2Q7Z4H3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms