Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC233992.3-201ENST00000607491 485 ntBASIC21.15■□□□□ 0.98
RNF44Q7L0R7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF44Q7L0R7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF44Q7L0R7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF44Q7L0R7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF44Q7L0R7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF44Q7L0R7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 RASA4CP-201ENST00000424092 1398 ntBASIC21.13■□□□□ 0.97
RNF44Q7L0R7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 AC008764.7-201ENST00000593779 1081 ntBASIC21.13■□□□□ 0.97
RNF44Q7L0R7 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF44Q7L0R7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 AC099791.1-201ENST00000416440 715 ntBASIC21.12■□□□□ 0.97
RNF44Q7L0R7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 AC010525.1-201ENST00000585559 441 ntBASIC21.12■□□□□ 0.97
RNF44Q7L0R7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RNF44Q7L0R7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.11■□□□□ 0.97
RNF44Q7L0R7 CA15P2-201ENST00000611168 834 ntBASIC21.11■□□□□ 0.97
RNF44Q7L0R7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF44Q7L0R7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF44Q7L0R7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF44Q7L0R7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF44Q7L0R7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF44Q7L0R7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF44Q7L0R7 DUSP8P5-201ENST00000422884 1815 ntBASIC21.08■□□□□ 0.96
RNF44Q7L0R7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF44Q7L0R7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF44Q7L0R7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF44Q7L0R7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms