Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 AC138932.1-201ENST00000534164 6830 ntBASIC16.64■□□□□ 0.25
MRPL54Q6P161 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL54Q6P161 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MRPL54Q6P161 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPL54Q6P161 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPL54Q6P161 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPL54Q6P161 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPL54Q6P161 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPL54Q6P161 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPL54Q6P161 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL54Q6P161 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.62■□□□□ 0.25
MRPL54Q6P161 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MRPL54Q6P161 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPL54Q6P161 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPL54Q6P161 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MRPL54Q6P161 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL54Q6P161 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.62■□□□□ 0.25
MRPL54Q6P161 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 AC025884.2-201ENST00000553429 711 ntBASIC16.61■□□□□ 0.25
MRPL54Q6P161 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL54Q6P161 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.61■□□□□ 0.25
MRPL54Q6P161 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPL54Q6P161 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.6■□□□□ 0.25
MRPL54Q6P161 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL54Q6P161 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
MRPL54Q6P161 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.59■□□□□ 0.25
MRPL54Q6P161 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MRPL54Q6P161 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL54Q6P161 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms