Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H2AA3Q6FI13 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H2AA3Q6FI13 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
HIST2H2AA3Q6FI13 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H2AA3Q6FI13 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H2AA3Q6FI13 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H2AA3Q6FI13 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 AC233723.2-201ENST00000623798 2106 ntBASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 AL499627.2-201ENST00000606283 725 ntBASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST2H2AA3Q6FI13 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 AC099791.2-201ENST00000605725 427 ntBASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 AC004687.1-201ENST00000579003 1625 ntBASIC21.25■□□□□ 0.99
HIST2H2AA3Q6FI13 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 AL512631.2-201ENST00000604634 923 ntBASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
HIST2H2AA3Q6FI13 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2AA3Q6FI13 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 pRNA.6-201ENST00000610482 90 ntBASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 pRNA.5-201ENST00000612139 90 ntBASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 pRNA.11-201ENST00000618423 90 ntBASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 pRNA.13-201ENST00000619112 90 ntBASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
HIST2H2AA3Q6FI13 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2AA3Q6FI13 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms