Protein–RNA interactions for Protein: Q63HK3

ZKSCAN2, Zinc finger protein with KRAB and SCAN domains 2, humanhuman

Predictions only

Length 967 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN2Q63HK3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC28.19■■■□□ 2.1
ZKSCAN2Q63HK3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 AC131281.2-201ENST00000520478 145 ntBASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 GUSBP5-202ENST00000510805 1989 ntBASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.18■■■□□ 2.1
ZKSCAN2Q63HK3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 pRNA.6-201ENST00000610482 90 ntBASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 pRNA.5-201ENST00000612139 90 ntBASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 pRNA.11-201ENST00000618423 90 ntBASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 pRNA.13-201ENST00000619112 90 ntBASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN2Q63HK3 AC127496.7-201ENST00000625110 1798 ntBASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN2Q63HK3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.15■■■□□ 2.1
ZKSCAN2Q63HK3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.15■■■□□ 2.1
ZKSCAN2Q63HK3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZKSCAN2Q63HK3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZKSCAN2Q63HK3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZKSCAN2Q63HK3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN2Q63HK3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
ZKSCAN2Q63HK3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.14■■■□□ 2.1
ZKSCAN2Q63HK3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN2Q63HK3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.14■■■□□ 2.1
ZKSCAN2Q63HK3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN2Q63HK3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN2Q63HK3 LINC01960-201ENST00000563759 1884 ntBASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 AC133637.1-201ENST00000624115 1537 ntBASIC28.12■■■□□ 2.09
ZKSCAN2Q63HK3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 MIR3181-201ENST00000578512 73 ntBASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
ZKSCAN2Q63HK3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZKSCAN2Q63HK3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZKSCAN2Q63HK3 AC092171.4-201ENST00000609130 632 ntBASIC28.1■■■□□ 2.09
ZKSCAN2Q63HK3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZKSCAN2Q63HK3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZKSCAN2Q63HK3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZKSCAN2Q63HK3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ZKSCAN2Q63HK3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.09■■■□□ 2.09
ZKSCAN2Q63HK3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZKSCAN2Q63HK3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZKSCAN2Q63HK3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 AC079834.2-201ENST00000609776 1949 ntBASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 AC131212.1-201ENST00000613771 668 ntBASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 ECEL1P1-201ENST00000373592 1742 ntBASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
ZKSCAN2Q63HK3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZKSCAN2Q63HK3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZKSCAN2Q63HK3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
ZKSCAN2Q63HK3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZKSCAN2Q63HK3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZKSCAN2Q63HK3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms