Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 pRNA.6-201ENST00000610482 90 ntBASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 pRNA.5-201ENST00000612139 90 ntBASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 pRNA.11-201ENST00000618423 90 ntBASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 pRNA.13-201ENST00000619112 90 ntBASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 AL117328.2-201ENST00000624617 1940 ntBASIC21.82■■□□□ 1.08
CTSL3PQ5NE16 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 GUSBP5-202ENST00000510805 1989 ntBASIC21.81■■□□□ 1.08
CTSL3PQ5NE16 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CTSL3PQ5NE16 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 AC127496.7-201ENST00000625110 1798 ntBASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSL3PQ5NE16 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 MIR3181-201ENST00000578512 73 ntBASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 AC131212.1-201ENST00000613771 668 ntBASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 AC133637.1-201ENST00000624115 1537 ntBASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTSL3PQ5NE16 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 LINC01960-201ENST00000563759 1884 ntBASIC21.77■■□□□ 1.08
CTSL3PQ5NE16 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CTSL3PQ5NE16 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSL3PQ5NE16 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSL3PQ5NE16 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSL3PQ5NE16 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 EP400NL-214ENST00000641289 2402 ntBASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 SERBP1P1-201ENST00000396021 1160 ntBASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 AL136116.3-201ENST00000402907 1138 ntBASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 AC092171.4-201ENST00000609130 632 ntBASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CTSL3PQ5NE16 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms