Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 FP325331.1-202ENST00000623531 1380 ntBASIC21.37■■□□□ 1.01
SGO1Q5FBB7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.37■■□□□ 1.01
SGO1Q5FBB7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.36■■□□□ 1.01
SGO1Q5FBB7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SGO1Q5FBB7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SGO1Q5FBB7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.34■■□□□ 1.01
SGO1Q5FBB7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 AL035685.1-201ENST00000636663 812 ntBASIC21.34■■□□□ 1.01
SGO1Q5FBB7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 LINC00526-201ENST00000581067 1875 ntBASIC21.34■■□□□ 1.01
SGO1Q5FBB7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SGO1Q5FBB7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.33■■□□□ 1.01
SGO1Q5FBB7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SGO1Q5FBB7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SGO1Q5FBB7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.33■■□□□ 1
SGO1Q5FBB7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SGO1Q5FBB7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.33■■□□□ 1
SGO1Q5FBB7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.32■■□□□ 1
SGO1Q5FBB7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.32■■□□□ 1
SGO1Q5FBB7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SGO1Q5FBB7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SGO1Q5FBB7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.32■■□□□ 1
SGO1Q5FBB7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SGO1Q5FBB7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SGO1Q5FBB7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SGO1Q5FBB7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SGO1Q5FBB7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SGO1Q5FBB7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.32■■□□□ 1
SGO1Q5FBB7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SGO1Q5FBB7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SGO1Q5FBB7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.31■■□□□ 1
SGO1Q5FBB7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 LINC00565-201ENST00000562710 2331 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
SGO1Q5FBB7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.31■■□□□ 1
SGO1Q5FBB7 KRT16P3-201ENST00000439127 1283 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 DUX4L4-201ENST00000566884 1269 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 MIR6724-1-201ENST00000616420 92 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 MIR6724-2-201ENST00000616483 92 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 MIR6724-4-201ENST00000617390 92 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 MIR6724-3-201ENST00000622482 92 ntBASIC21.31■■□□□ 1
SGO1Q5FBB7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
SGO1Q5FBB7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SGO1Q5FBB7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SGO1Q5FBB7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms