Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 ESRRAP2-201ENST00000418437 1549 ntBASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTC1Q2NKJ3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 AC010525.1-201ENST00000585559 441 ntBASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 AC104771.1-201ENST00000603335 964 ntBASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 AL499627.2-201ENST00000606283 725 ntBASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.67■■□□□ 1.38
CTC1Q2NKJ3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTC1Q2NKJ3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.66■■□□□ 1.38
CTC1Q2NKJ3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTC1Q2NKJ3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.66■■□□□ 1.38
CTC1Q2NKJ3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CTC1Q2NKJ3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.66■■□□□ 1.38
CTC1Q2NKJ3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 OR2I1P-207ENST00000453522 948 ntBASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CTC1Q2NKJ3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CTC1Q2NKJ3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.64■■□□□ 1.38
CTC1Q2NKJ3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTC1Q2NKJ3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTC1Q2NKJ3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 AC026185.1-201ENST00000445748 174 ntBASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CTC1Q2NKJ3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 AP005435.1-201ENST00000529293 1178 ntBASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTC1Q2NKJ3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 AC137761.2-201ENST00000561729 223 ntBASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 AC145350.3-201ENST00000569033 163 ntBASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 AC068473.5-201ENST00000616428 2072 ntBASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CTC1Q2NKJ3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 AC016769.1-201ENST00000409132 1010 ntBASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTC1Q2NKJ3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 AC105233.4-201ENST00000642045 216 ntBASIC23.6■■□□□ 1.37
CTC1Q2NKJ3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms