Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YNL320WYNL320W 855 nt5.12□□□□□ -1.59
SSL1Q04673 SNF8YPL002C 702 nt5.12□□□□□ -1.59
SSL1Q04673 PRO2YOR323C 1371 nt5.12□□□□□ -1.59
SSL1Q04673 SSZ1YHR064C 1617 nt5.12□□□□□ -1.59
SSL1Q04673 GGA1YDR358W 1674 nt5.12□□□□□ -1.59
SSL1Q04673 RIM101YHL027W 1878 nt5.11□□□□□ -1.59
SSL1Q04673 YEL077CYEL077C 3834 nt5.11□□□□□ -1.59
SSL1Q04673 UBA2YDR390C 1911 nt5.11□□□□□ -1.59
SSL1Q04673 YDR053WYDR053W 396 nt5.11□□□□□ -1.59
SSL1Q04673 GLE2YER107C 1098 nt5.11□□□□□ -1.59
SSL1Q04673 YER133W-AYER133W-A 342 nt5.11□□□□□ -1.59
SSL1Q04673 YFL012W-AYFL012W-A 375 nt5.11□□□□□ -1.59
SSL1Q04673 CKA1YIL035C 1119 nt5.11□□□□□ -1.59
SSL1Q04673 PRP45YAL032C 1140 nt5.11□□□□□ -1.59
SSL1Q04673 YKL223WYKL223W 333 nt5.11□□□□□ -1.59
SSL1Q04673 YKR041WYKR041W 753 nt5.11□□□□□ -1.59
SSL1Q04673 RPA49YNL248C 1248 nt5.11□□□□□ -1.59
SSL1Q04673 snR11snR11 258 nt5.11□□□□□ -1.59
SSL1Q04673 ETR1YBR026C 1143 nt5.11□□□□□ -1.59
SSL1Q04673 RMI1YPL024W 726 nt5.11□□□□□ -1.59
SSL1Q04673 COX11YPL132W 903 nt5.11□□□□□ -1.59
SSL1Q04673 ECM33YBR078W 1290 nt5.11□□□□□ -1.59
SSL1Q04673 RPT4YOR259C 1314 nt5.11□□□□□ -1.59
SSL1Q04673 SPT14YPL175W 1359 nt5.11□□□□□ -1.59
SSL1Q04673 MIC60YKR016W 1623 nt5.11□□□□□ -1.59
SSL1Q04673 THI21YPL258C 1656 nt5.11□□□□□ -1.59
SSL1Q04673 GAL10YBR019C 2100 nt5.11□□□□□ -1.59
SSL1Q04673 PST1YDR055W 1335 nt5.1□□□□□ -1.59
SSL1Q04673 YOR1YGR281W 4434 nt5.1□□□□□ -1.59
SSL1Q04673 APM2YHL019C 1818 nt5.1□□□□□ -1.59
SSL1Q04673 PRP21YJL203W 843 nt5.1□□□□□ -1.59
SSL1Q04673 STR2YJR130C 1920 nt5.1□□□□□ -1.59
SSL1Q04673 ATP14YLR295C 375 nt5.1□□□□□ -1.59
SSL1Q04673 ECM15YBL001C 315 nt5.1□□□□□ -1.59
SSL1Q04673 TRI1YMR233W 681 nt5.1□□□□□ -1.59
SSL1Q04673 YNR061CYNR061C 660 nt5.1□□□□□ -1.59
SSL1Q04673 PDX3YBR035C 687 nt5.1□□□□□ -1.59
SSL1Q04673 ERT1YBR239C 1590 nt5.1□□□□□ -1.59
SSL1Q04673 YHR202WYHR202W 1809 nt5.09□□□□□ -1.59
SSL1Q04673 RCK2YLR248W 1833 nt5.09□□□□□ -1.59
SSL1Q04673 CIK1YMR198W 1785 nt5.09□□□□□ -1.59
SSL1Q04673 GLT1YDL171C 6438 nt5.09□□□□□ -1.59
SSL1Q04673 SUP45YBR143C 1314 nt5.09□□□□□ -1.59
SSL1Q04673 CBS1YDL069C 690 nt5.09□□□□□ -1.59
SSL1Q04673 ISC10YER180C 804 nt5.09□□□□□ -1.59
SSL1Q04673 YPT6YLR262C 648 nt5.09□□□□□ -1.59
SSL1Q04673 YMR158C-AYMR158C-A 138 nt5.09□□□□□ -1.59
SSL1Q04673 RAS1YOR101W 930 nt5.09□□□□□ -1.59
SSL1Q04673 YBR196C-BYBR196C-B 105 nt5.09□□□□□ -1.59
SSL1Q04673 DCC1YCL016C 1143 nt5.09□□□□□ -1.59
SSL1Q04673 SEC9YGR009C 1956 nt5.09□□□□□ -1.6
SSL1Q04673 YAP1YML007W 1953 nt5.09□□□□□ -1.6
SSL1Q04673 MBP1YDL056W 2502 nt5.08□□□□□ -1.6
SSL1Q04673 KTR7YIL085C 1554 nt5.08□□□□□ -1.6
SSL1Q04673 NOP58YOR310C 1536 nt5.08□□□□□ -1.6
SSL1Q04673 CPR4YCR069W 957 nt5.08□□□□□ -1.6
SSL1Q04673 PEX18YHR160C 852 nt5.08□□□□□ -1.6
SSL1Q04673 TVP38YKR088C 1014 nt5.08□□□□□ -1.6
SSL1Q04673 ERD2YBL040C 660 nt5.08□□□□□ -1.6
SSL1Q04673 RPL21BYPL079W 483 nt5.08□□□□□ -1.6
SSL1Q04673 CMR3YPR013C 954 nt5.08□□□□□ -1.6
SSL1Q04673 MOT2YER068W 1764 nt5.08□□□□□ -1.6
SSL1Q04673 SMF1YOL122C 1728 nt5.08□□□□□ -1.6
SSL1Q04673 NPL4YBR170C 1743 nt5.08□□□□□ -1.6
SSL1Q04673 AVT3YKL146W 2079 nt5.08□□□□□ -1.6
SSL1Q04673 NDC1YML031W 1968 nt5.07□□□□□ -1.6
SSL1Q04673 HPC2YBR215W 1878 nt5.07□□□□□ -1.6
SSL1Q04673 RGT1YKL038W 3513 nt5.07□□□□□ -1.6
SSL1Q04673 NRG1YDR043C 696 nt5.07□□□□□ -1.6
SSL1Q04673 PET100YDR079W 336 nt5.07□□□□□ -1.6
SSL1Q04673 PDS1YDR113C 1122 nt5.07□□□□□ -1.6
SSL1Q04673 YHR193C-AYHR193C-A 375 nt5.07□□□□□ -1.6
SSL1Q04673 GCD7YLR291C 1146 nt5.07□□□□□ -1.6
SSL1Q04673 UAF30YOR295W 687 nt5.07□□□□□ -1.6
SSL1Q04673 ATG5YPL149W 885 nt5.07□□□□□ -1.6
SSL1Q04673 ERG4YGL012W 1422 nt5.06□□□□□ -1.6
SSL1Q04673 MRS2YOR334W 1413 nt5.06□□□□□ -1.6
SSL1Q04673 MAL12YGR292W 1755 nt5.06□□□□□ -1.6
SSL1Q04673 MNN2YBR015C 1794 nt5.06□□□□□ -1.6
SSL1Q04673 MAL32YBR299W 1755 nt5.06□□□□□ -1.6
SSL1Q04673 SUM1YDR310C 3189 nt5.06□□□□□ -1.6
SSL1Q04673 YNL011CYNL011C 1335 nt5.06□□□□□ -1.6
SSL1Q04673 ARO2YGL148W 1131 nt5.06□□□□□ -1.6
SSL1Q04673 DAM1YGR113W 1032 nt5.06□□□□□ -1.6
SSL1Q04673 DBP8YHR169W 1296 nt5.06□□□□□ -1.6
SSL1Q04673 YKL162CYKL162C 1209 nt5.06□□□□□ -1.6
SSL1Q04673 ATG33YLR356W 594 nt5.06□□□□□ -1.6
SSL1Q04673 PNG1YPL096W 1092 nt5.06□□□□□ -1.6
SSL1Q04673 YCL007CYCL007C 393 nt5.06□□□□□ -1.6
SSL1Q04673 OCT1YKL134C 2319 nt5.06□□□□□ -1.6
SSL1Q04673 PDC1YLR044C 1692 nt5.05□□□□□ -1.6
SSL1Q04673 ARN1YHL040C 1884 nt5.05□□□□□ -1.6
SSL1Q04673 DBF4YDR052C 2115 nt5.05□□□□□ -1.6
SSL1Q04673 MCM4YPR019W 2802 nt5.05□□□□□ -1.6
SSL1Q04673 RNA15YGL044C 891 nt5.05□□□□□ -1.6
SSL1Q04673 PPX1YHR201C 1194 nt5.05□□□□□ -1.6
SSL1Q04673 GVP36YIL041W 981 nt5.05□□□□□ -1.6
SSL1Q04673 MTW1YAL034W-A 870 nt5.05□□□□□ -1.6
SSL1Q04673 BAT2YJR148W 1131 nt5.05□□□□□ -1.6
SSL1Q04673 HMX1YLR205C 954 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms