Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 XKS1YGR194C 1803 nt4.42□□□□□ -1.7
RPA49Q01080 TMA17YDL110C 453 nt4.42□□□□□ -1.7
RPA49Q01080 THI13YDL244W 1023 nt4.42□□□□□ -1.7
RPA49Q01080 YGR204C-AYGR204C-A 114 nt4.42□□□□□ -1.7
RPA49Q01080 YGR269WYGR269W 327 nt4.42□□□□□ -1.7
RPA49Q01080 MRP4YHL004W 1185 nt4.42□□□□□ -1.7
RPA49Q01080 FMP33YJL161W 543 nt4.42□□□□□ -1.7
RPA49Q01080 ATP12YJL180C 978 nt4.42□□□□□ -1.7
RPA49Q01080 TTI2YJR136C 1266 nt4.42□□□□□ -1.7
RPA49Q01080 THI11YJR156C 1023 nt4.42□□□□□ -1.7
RPA49Q01080 JLP1YLL057C 1239 nt4.42□□□□□ -1.7
RPA49Q01080 RFU1YLR073C 603 nt4.42□□□□□ -1.7
RPA49Q01080 ATG8YBL078C 354 nt4.42□□□□□ -1.7
RPA49Q01080 DSS4YPR017C 432 nt4.42□□□□□ -1.7
RPA49Q01080 PUF2YPR042C 3228 nt4.42□□□□□ -1.7
RPA49Q01080 GLN4YOR168W 2430 nt4.42□□□□□ -1.7
RPA49Q01080 HRK1YOR267C 2280 nt4.42□□□□□ -1.7
RPA49Q01080 TPO2YGR138C 1845 nt4.42□□□□□ -1.7
RPA49Q01080 MDR1YGR100W 2853 nt4.41□□□□□ -1.7
RPA49Q01080 IOC4YMR044W 1428 nt4.41□□□□□ -1.7
RPA49Q01080 ARX1YDR101C 1782 nt4.41□□□□□ -1.7
RPA49Q01080 GRX6YDL010W 696 nt4.41□□□□□ -1.7
RPA49Q01080 YDL241WYDL241W 372 nt4.41□□□□□ -1.7
RPA49Q01080 SEM1YDR363W-A 270 nt4.41□□□□□ -1.7
RPA49Q01080 YIR018C-AYIR018C-A 138 nt4.41□□□□□ -1.7
RPA49Q01080 YRA2YKL214C 612 nt4.41□□□□□ -1.7
RPA49Q01080 NSE1YLR007W 1011 nt4.41□□□□□ -1.7
RPA49Q01080 SEC72YLR292C 582 nt4.41□□□□□ -1.7
RPA49Q01080 RPS1BYML063W 768 nt4.41□□□□□ -1.7
RPA49Q01080 CPR3YML078W 549 nt4.41□□□□□ -1.7
RPA49Q01080 MRPL3YMR024W 1173 nt4.41□□□□□ -1.7
RPA49Q01080 PBN1YCL052C 1251 nt4.41□□□□□ -1.7
RPA49Q01080 AVT1YJR001W 1809 nt4.41□□□□□ -1.7
RPA49Q01080 YDR246W-AYDR246W-A 201 nt4.4□□□□□ -1.71
RPA49Q01080 RMD5YDR255C 1266 nt4.4□□□□□ -1.71
RPA49Q01080 YJR038CYJR038C 363 nt4.4□□□□□ -1.71
RPA49Q01080 RNA1YMR235C 1224 nt4.4□□□□□ -1.71
RPA49Q01080 YOR131CYOR131C 657 nt4.4□□□□□ -1.71
RPA49Q01080 CNS1YBR155W 1158 nt4.4□□□□□ -1.71
RPA49Q01080 SPO1YNL012W 1896 nt4.4□□□□□ -1.71
RPA49Q01080 RSC58YLR033W 1509 nt4.4□□□□□ -1.71
RPA49Q01080 YNR065CYNR065C 3351 nt4.4□□□□□ -1.71
RPA49Q01080 PMC1YGL006W 3522 nt4.39□□□□□ -1.71
RPA49Q01080 YDL094CYDL094C 510 nt4.39□□□□□ -1.71
RPA49Q01080 YDL228CYDL228C 642 nt4.39□□□□□ -1.71
RPA49Q01080 MIC26YGR235C 702 nt4.39□□□□□ -1.71
RPA49Q01080 ERD2YBL040C 660 nt4.39□□□□□ -1.71
RPA49Q01080 MET16YPR167C 786 nt4.39□□□□□ -1.71
RPA49Q01080 CDC6YJL194W 1542 nt4.38□□□□□ -1.71
RPA49Q01080 YDL124WYDL124W 939 nt4.38□□□□□ -1.71
RPA49Q01080 NDJ1YOL104C 1059 nt4.38□□□□□ -1.71
RPA49Q01080 SRO9YCL037C 1305 nt4.38□□□□□ -1.71
RPA49Q01080 SRS2YJL092W 3525 nt4.38□□□□□ -1.71
RPA49Q01080 snR7-LsnR7-L 214 nt4.37□□□□□ -1.71
RPA49Q01080 DPB4YDR121W 591 nt4.37□□□□□ -1.71
RPA49Q01080 TYS1YGR185C 1185 nt4.37□□□□□ -1.71
RPA49Q01080 ORM2YLR350W 651 nt4.37□□□□□ -1.71
RPA49Q01080 AIM39YOL053W 1188 nt4.37□□□□□ -1.71
RPA49Q01080 YOR020W-AYOR020W-A 273 nt4.37□□□□□ -1.71
RPA49Q01080 EMP47YFL048C 1338 nt4.37□□□□□ -1.71
RPA49Q01080 MET17YLR303W 1335 nt4.37□□□□□ -1.71
RPA49Q01080 RTK1YDL025C 1863 nt4.37□□□□□ -1.71
RPA49Q01080 DIT2YDR402C 1470 nt4.37□□□□□ -1.71
RPA49Q01080 NAM9YNL137C 1461 nt4.37□□□□□ -1.71
RPA49Q01080 PUT2YHR037W 1728 nt4.36□□□□□ -1.71
RPA49Q01080 YDR222WYDR222W 1248 nt4.36□□□□□ -1.71
RPA49Q01080 UBC8YEL012W 657 nt4.36□□□□□ -1.71
RPA49Q01080 YGR219WYGR219W 342 nt4.36□□□□□ -1.71
RPA49Q01080 SAE3YHR079C-A 276 nt4.36□□□□□ -1.71
RPA49Q01080 HMS1YOR032C 1305 nt4.36□□□□□ -1.71
RPA49Q01080 UPC2YDR213W 2742 nt4.36□□□□□ -1.71
RPA49Q01080 HPR1YDR138W 2259 nt4.35□□□□□ -1.71
RPA49Q01080 CDC15YAR019C 2925 nt4.35□□□□□ -1.71
RPA49Q01080 YKL177WYKL177W 339 nt4.35□□□□□ -1.71
RPA49Q01080 PER33YLR064W 822 nt4.35□□□□□ -1.71
RPA49Q01080 HRT3YLR097C 1035 nt4.35□□□□□ -1.71
RPA49Q01080 YPR059CYPR059C 387 nt4.35□□□□□ -1.71
RPA49Q01080 SHE3YBR130C 1278 nt4.35□□□□□ -1.71
RPA49Q01080 BCH2YKR027W 2298 nt4.35□□□□□ -1.71
RPA49Q01080 RIA1YNL163C 3333 nt4.34□□□□□ -1.71
RPA49Q01080 ELO2YCR034W 1044 nt4.34□□□□□ -1.71
RPA49Q01080 SOL4YGR248W 768 nt4.34□□□□□ -1.71
RPA49Q01080 GCD7YLR291C 1146 nt4.34□□□□□ -1.71
RPA49Q01080 CLB5YPR120C 1308 nt4.34□□□□□ -1.71
RPA49Q01080 PHO87YCR037C 2772 nt4.34□□□□□ -1.72
RPA49Q01080 YOL075CYOL075C 3885 nt4.33□□□□□ -1.72
RPA49Q01080 PFK1YGR240C 2964 nt4.33□□□□□ -1.72
RPA49Q01080 ALE1YOR175C 1860 nt4.33□□□□□ -1.72
RPA49Q01080 RCM1YNL022C 1473 nt4.33□□□□□ -1.72
RPA49Q01080 KRE29YER038C 1395 nt4.33□□□□□ -1.72
RPA49Q01080 snR63snR63 255 nt4.33□□□□□ -1.72
RPA49Q01080 YAE1YJR067C 426 nt4.33□□□□□ -1.72
RPA49Q01080 KTR2YKR061W 1278 nt4.33□□□□□ -1.72
RPA49Q01080 OMA1YKR087C 1038 nt4.33□□□□□ -1.72
RPA49Q01080 TDA5YLR426W 981 nt4.33□□□□□ -1.72
RPA49Q01080 VPS21YOR089C 633 nt4.33□□□□□ -1.72
RPA49Q01080 YSA1YBR111C 696 nt4.33□□□□□ -1.72
RPA49Q01080 FAS2YPL231W 5664 nt4.33□□□□□ -1.72
RPA49Q01080 YGR266WYGR266W 2106 nt4.33□□□□□ -1.72
RPA49Q01080 CWH43YCR017C 2862 nt4.32□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms