Protein–RNA interactions for Protein: P59037

LINC00313, Putative uncharacterized protein encoded by LINC00313, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313P59037 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00313P59037 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00313P59037 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00313P59037 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00313P59037 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
LINC00313P59037 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00313P59037 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00313P59037 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00313P59037 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00313P59037 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00313P59037 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC00313P59037 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
LINC00313P59037 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00313P59037 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC00313P59037 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC00313P59037 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 HCG11-201ENST00000411553 5696 ntBASIC12.52□□□□□ -0.41
LINC00313P59037 COMT-203ENST00000403184 2217 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00313P59037 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00313P59037 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 AC019171.1-201ENST00000601251 1056 ntBASIC12.52□□□□□ -0.41
LINC00313P59037 AC129492.7-201ENST00000622992 756 ntBASIC12.52□□□□□ -0.41
LINC00313P59037 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00313P59037 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00313P59037 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00313P59037 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC00313P59037 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00313P59037 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00313P59037 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00313P59037 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00313P59037 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 AC079630.1-202ENST00000618127 1840 ntBASIC12.51□□□□□ -0.41
LINC00313P59037 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00313P59037 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 AC137767.1-201ENST00000602918 1920 ntBASIC12.5□□□□□ -0.41
LINC00313P59037 LSR-203ENST00000360798 1963 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00313P59037 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00313P59037 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00313P59037 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00313P59037 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC00313P59037 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00313P59037 BHLHE23-202ENST00000612929 1109 ntBASIC12.5□□□□□ -0.41
LINC00313P59037 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
LINC00313P59037 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00313P59037 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00313P59037 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
LINC00313P59037 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00313P59037 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00313P59037 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00313P59037 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00313P59037 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00313P59037 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00313P59037 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00313P59037 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00313P59037 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00313P59037 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms