Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGA2P52926 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.2■□□□□ 0.82
HMGA2P52926 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGA2P52926 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGA2P52926 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.2■□□□□ 0.82
HMGA2P52926 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGA2P52926 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGA2P52926 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGA2P52926 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGA2P52926 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HMGA2P52926 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HMGA2P52926 DUX4L4-201ENST00000566884 1269 ntBASIC20.19■□□□□ 0.82
HMGA2P52926 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.19■□□□□ 0.82
HMGA2P52926 AC137630.3-201ENST00000607245 391 ntBASIC20.19■□□□□ 0.82
HMGA2P52926 MIR6722-201ENST00000617286 78 ntBASIC20.19■□□□□ 0.82
HMGA2P52926 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGA2P52926 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGA2P52926 AC010542.4-201ENST00000563151 1910 ntBASIC20.19■□□□□ 0.82
HMGA2P52926 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGA2P52926 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGA2P52926 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGA2P52926 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HMGA2P52926 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGA2P52926 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGA2P52926 TSPY13P-201ENST00000338964 914 ntBASIC20.18■□□□□ 0.82
HMGA2P52926 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGA2P52926 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HMGA2P52926 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.18■□□□□ 0.82
HMGA2P52926 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
HMGA2P52926 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGA2P52926 LINC01960-201ENST00000563759 1884 ntBASIC20.18■□□□□ 0.82
HMGA2P52926 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGA2P52926 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HMGA2P52926 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGA2P52926 AL024507.2-201ENST00000606070 2574 ntBASIC20.17■□□□□ 0.82
HMGA2P52926 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGA2P52926 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGA2P52926 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGA2P52926 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.17■□□□□ 0.82
HMGA2P52926 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGA2P52926 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGA2P52926 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGA2P52926 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGA2P52926 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGA2P52926 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGA2P52926 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGA2P52926 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGA2P52926 AC009086.3-201ENST00000623486 1008 ntBASIC20.16■□□□□ 0.82
HMGA2P52926 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 AC005703.6-201ENST00000623265 1329 ntBASIC20.16■□□□□ 0.82
HMGA2P52926 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGA2P52926 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 AC103834.1-201ENST00000520383 144 ntBASIC20.15■□□□□ 0.82
HMGA2P52926 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGA2P52926 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGA2P52926 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HMGA2P52926 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 FAM99A-202ENST00000538190 1989 ntBASIC20.15■□□□□ 0.82
HMGA2P52926 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGA2P52926 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGA2P52926 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGA2P52926 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.14■□□□□ 0.82
HMGA2P52926 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGA2P52926 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
HMGA2P52926 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGA2P52926 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGA2P52926 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGA2P52926 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGA2P52926 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HMGA2P52926 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HMGA2P52926 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGA2P52926 CA15P2-201ENST00000611168 834 ntBASIC20.14■□□□□ 0.81
HMGA2P52926 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
HMGA2P52926 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGA2P52926 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGA2P52926 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGA2P52926 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HMGA2P52926 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HMGA2P52926 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.13■□□□□ 0.81
HMGA2P52926 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGA2P52926 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HMGA2P52926 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGA2P52926 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGA2P52926 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms