Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
RFX5P48382 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.35■■□□□ 1.97
RFX5P48382 AL031602.1-201ENST00000633169 911 ntBASIC27.35■■□□□ 1.97
RFX5P48382 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFX5P48382 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
RFX5P48382 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.34■■□□□ 1.97
RFX5P48382 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RFX5P48382 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
RFX5P48382 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RFX5P48382 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.34■■□□□ 1.97
RFX5P48382 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.34■■□□□ 1.97
RFX5P48382 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RFX5P48382 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RFX5P48382 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFX5P48382 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.33■■□□□ 1.97
RFX5P48382 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
RFX5P48382 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RFX5P48382 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RFX5P48382 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFX5P48382 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
RFX5P48382 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
RFX5P48382 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC27.32■■□□□ 1.96
RFX5P48382 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.32■■□□□ 1.96
RFX5P48382 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX5P48382 JTB-203ENST00000368589 1216 ntTSL 2 BASIC27.32■■□□□ 1.96
RFX5P48382 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX5P48382 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.32■■□□□ 1.96
RFX5P48382 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
RFX5P48382 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.32■■□□□ 1.96
RFX5P48382 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.32■■□□□ 1.96
RFX5P48382 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RFX5P48382 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RFX5P48382 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.32■■□□□ 1.96
RFX5P48382 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFX5P48382 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFX5P48382 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFX5P48382 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.31■■□□□ 1.96
RFX5P48382 RARRES2P6-201ENST00000567333 442 ntBASIC27.31■■□□□ 1.96
RFX5P48382 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
RFX5P48382 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RFX5P48382 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFX5P48382 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.31■■□□□ 1.96
RFX5P48382 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
RFX5P48382 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RFX5P48382 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFX5P48382 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RFX5P48382 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RFX5P48382 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.3■■□□□ 1.96
RFX5P48382 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
RFX5P48382 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RFX5P48382 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.29■■□□□ 1.96
RFX5P48382 MIR572-201ENST00000384983 95 ntBASIC27.29■■□□□ 1.96
RFX5P48382 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFX5P48382 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.29■■□□□ 1.96
RFX5P48382 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.29■■□□□ 1.96
RFX5P48382 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.29■■□□□ 1.96
RFX5P48382 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RFX5P48382 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.29■■□□□ 1.96
RFX5P48382 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
RFX5P48382 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFX5P48382 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFX5P48382 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RFX5P48382 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
RFX5P48382 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX5P48382 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX5P48382 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX5P48382 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RFX5P48382 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.28■■□□□ 1.96
RFX5P48382 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RFX5P48382 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFX5P48382 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFX5P48382 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFX5P48382 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFX5P48382 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.27■■□□□ 1.96
RFX5P48382 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.27■■□□□ 1.96
RFX5P48382 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RFX5P48382 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
RFX5P48382 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.27■■□□□ 1.96
RFX5P48382 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFX5P48382 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.26■■□□□ 1.96
RFX5P48382 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.26■■□□□ 1.96
RFX5P48382 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RFX5P48382 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
RFX5P48382 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.26■■□□□ 1.95
RFX5P48382 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFX5P48382 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.25■■□□□ 1.95
RFX5P48382 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.25■■□□□ 1.95
RFX5P48382 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFX5P48382 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
RFX5P48382 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.24■■□□□ 1.95
RFX5P48382 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RFX5P48382 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
RFX5P48382 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms