Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KRT8P33-201ENST00000508125 1423 ntBASIC19.15■□□□□ 0.66
GDNFP39905 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GDNFP39905 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.15■□□□□ 0.66
GDNFP39905 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GDNFP39905 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
GDNFP39905 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GDNFP39905 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GDNFP39905 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.14■□□□□ 0.65
GDNFP39905 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.14■□□□□ 0.65
GDNFP39905 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GDNFP39905 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GDNFP39905 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.14■□□□□ 0.65
GDNFP39905 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GDNFP39905 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GDNFP39905 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
GDNFP39905 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GDNFP39905 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.13■□□□□ 0.65
GDNFP39905 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GDNFP39905 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.12■□□□□ 0.65
GDNFP39905 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.12■□□□□ 0.65
GDNFP39905 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GDNFP39905 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.12■□□□□ 0.65
GDNFP39905 AC079630.1-202ENST00000618127 1840 ntBASIC19.12■□□□□ 0.65
GDNFP39905 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDNFP39905 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDNFP39905 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDNFP39905 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.12■□□□□ 0.65
GDNFP39905 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GDNFP39905 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GDNFP39905 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GDNFP39905 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GDNFP39905 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
GDNFP39905 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.11■□□□□ 0.65
GDNFP39905 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.11■□□□□ 0.65
GDNFP39905 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.11■□□□□ 0.65
GDNFP39905 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
GDNFP39905 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.11■□□□□ 0.65
GDNFP39905 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
GDNFP39905 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 AC022616.5-201ENST00000518796 181 ntBASIC19.11■□□□□ 0.65
GDNFP39905 AC120024.1-201ENST00000562672 995 ntBASIC19.11■□□□□ 0.65
GDNFP39905 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 AC080038.3-201ENST00000623346 1952 ntBASIC19.11■□□□□ 0.65
GDNFP39905 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
GDNFP39905 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDNFP39905 AL022069.1-201ENST00000568025 1636 ntBASIC19.11■□□□□ 0.65
GDNFP39905 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDNFP39905 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GDNFP39905 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GDNFP39905 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.1■□□□□ 0.65
GDNFP39905 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDNFP39905 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDNFP39905 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.09■□□□□ 0.65
GDNFP39905 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.09■□□□□ 0.65
GDNFP39905 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.09■□□□□ 0.65
GDNFP39905 MIR4508-201ENST00000584178 70 ntBASIC19.09■□□□□ 0.65
GDNFP39905 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GDNFP39905 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
GDNFP39905 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDNFP39905 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDNFP39905 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.08■□□□□ 0.65
GDNFP39905 ALDH1A3-203ENST00000557963 1670 ntBASIC19.08■□□□□ 0.65
GDNFP39905 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GDNFP39905 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDNFP39905 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.08■□□□□ 0.65
GDNFP39905 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
GDNFP39905 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDNFP39905 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
GDNFP39905 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms