Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.86■□□□□ 0.45
SAA4P35542 AP005435.1-201ENST00000529293 1178 ntBASIC17.86■□□□□ 0.45
SAA4P35542 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.86■□□□□ 0.45
SAA4P35542 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
SAA4P35542 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SAA4P35542 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SAA4P35542 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA4P35542 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA4P35542 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SAA4P35542 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SAA4P35542 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SAA4P35542 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SAA4P35542 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.85■□□□□ 0.45
SAA4P35542 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.85■□□□□ 0.45
SAA4P35542 RARRES2P6-201ENST00000567333 442 ntBASIC17.85■□□□□ 0.45
SAA4P35542 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SAA4P35542 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SAA4P35542 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SAA4P35542 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SAA4P35542 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SAA4P35542 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SAA4P35542 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.84■□□□□ 0.45
SAA4P35542 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SAA4P35542 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SAA4P35542 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SAA4P35542 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SAA4P35542 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.84■□□□□ 0.45
SAA4P35542 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SAA4P35542 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.84■□□□□ 0.45
SAA4P35542 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SAA4P35542 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.84■□□□□ 0.45
SAA4P35542 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.84■□□□□ 0.45
SAA4P35542 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.84■□□□□ 0.45
SAA4P35542 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SAA4P35542 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SAA4P35542 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SAA4P35542 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SAA4P35542 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SAA4P35542 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SAA4P35542 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
SAA4P35542 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.83■□□□□ 0.45
SAA4P35542 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.83■□□□□ 0.44
SAA4P35542 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SAA4P35542 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SAA4P35542 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SAA4P35542 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SAA4P35542 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.83■□□□□ 0.44
SAA4P35542 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SAA4P35542 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
SAA4P35542 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SAA4P35542 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.82■□□□□ 0.44
SAA4P35542 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.82■□□□□ 0.44
SAA4P35542 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SAA4P35542 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.82■□□□□ 0.44
SAA4P35542 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.82■□□□□ 0.44
SAA4P35542 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SAA4P35542 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA4P35542 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA4P35542 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA4P35542 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.81■□□□□ 0.44
SAA4P35542 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.81■□□□□ 0.44
SAA4P35542 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.81■□□□□ 0.44
SAA4P35542 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.81■□□□□ 0.44
SAA4P35542 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.81■□□□□ 0.44
SAA4P35542 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.81■□□□□ 0.44
SAA4P35542 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SAA4P35542 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.81■□□□□ 0.44
SAA4P35542 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
SAA4P35542 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SAA4P35542 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.8■□□□□ 0.44
SAA4P35542 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.8■□□□□ 0.44
SAA4P35542 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SAA4P35542 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.8■□□□□ 0.44
SAA4P35542 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
SAA4P35542 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 MIR572-201ENST00000384983 95 ntBASIC17.8■□□□□ 0.44
SAA4P35542 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
SAA4P35542 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.8■□□□□ 0.44
SAA4P35542 AC068587.7-201ENST00000641602 218 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms