Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AC241377.3-202ENST00000626088 1088 ntBASIC19.36■□□□□ 0.69
THBS4P35443 AC241585.3-202ENST00000628937 1088 ntBASIC19.36■□□□□ 0.69
THBS4P35443 AC245100.8-202ENST00000629247 1058 ntBASIC19.36■□□□□ 0.69
THBS4P35443 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
THBS4P35443 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS4P35443 SYT6-210ENST00000641643 1587 ntBASIC19.36■□□□□ 0.69
THBS4P35443 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
THBS4P35443 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.35■□□□□ 0.69
THBS4P35443 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
THBS4P35443 AC019069.1-201ENST00000610008 1333 ntBASIC19.35■□□□□ 0.69
THBS4P35443 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.35■□□□□ 0.69
THBS4P35443 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
THBS4P35443 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.35■□□□□ 0.69
THBS4P35443 AC106739.1-201ENST00000617035 715 ntBASIC19.35■□□□□ 0.69
THBS4P35443 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
THBS4P35443 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
THBS4P35443 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS4P35443 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 AC135279.3-201ENST00000610945 1311 ntBASIC19.34■□□□□ 0.69
THBS4P35443 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.34■□□□□ 0.69
THBS4P35443 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 AC024257.2-201ENST00000549699 147 ntBASIC19.34■□□□□ 0.69
THBS4P35443 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.34■□□□□ 0.69
THBS4P35443 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
THBS4P35443 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
THBS4P35443 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS4P35443 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS4P35443 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS4P35443 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS4P35443 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS4P35443 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS4P35443 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
THBS4P35443 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.33■□□□□ 0.68
THBS4P35443 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.33■□□□□ 0.68
THBS4P35443 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
THBS4P35443 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
THBS4P35443 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
THBS4P35443 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
THBS4P35443 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
THBS4P35443 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
THBS4P35443 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
THBS4P35443 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 SERBP1P1-201ENST00000396021 1160 ntBASIC19.32■□□□□ 0.68
THBS4P35443 AC006455.2-201ENST00000429931 906 ntBASIC19.32■□□□□ 0.68
THBS4P35443 AC133561.4-201ENST00000566112 224 ntBASIC19.32■□□□□ 0.68
THBS4P35443 AC005837.3-201ENST00000612163 286 ntBASIC19.32■□□□□ 0.68
THBS4P35443 AC009086.3-201ENST00000623486 1008 ntBASIC19.32■□□□□ 0.68
THBS4P35443 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.32■□□□□ 0.68
THBS4P35443 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.32■□□□□ 0.68
THBS4P35443 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
THBS4P35443 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
THBS4P35443 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
THBS4P35443 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS4P35443 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
THBS4P35443 ESRRAP2-201ENST00000418437 1549 ntBASIC19.31■□□□□ 0.68
THBS4P35443 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.31■□□□□ 0.68
THBS4P35443 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.31■□□□□ 0.68
THBS4P35443 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS4P35443 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS4P35443 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
THBS4P35443 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS4P35443 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS4P35443 GUSBP5-202ENST00000510805 1989 ntBASIC19.3■□□□□ 0.68
THBS4P35443 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS4P35443 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS4P35443 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.3■□□□□ 0.68
THBS4P35443 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
THBS4P35443 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
THBS4P35443 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
THBS4P35443 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.3■□□□□ 0.68
THBS4P35443 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.3■□□□□ 0.68
THBS4P35443 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THBS4P35443 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS4P35443 AL353803.4-201ENST00000565882 1934 ntBASIC19.29■□□□□ 0.68
THBS4P35443 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THBS4P35443 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.29■□□□□ 0.68
THBS4P35443 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.29■□□□□ 0.68
THBS4P35443 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THBS4P35443 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.29■□□□□ 0.68
THBS4P35443 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
THBS4P35443 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
THBS4P35443 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms