Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN6P29350 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN6P29350 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN6P29350 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN6P29350 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN6P29350 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
PTPN6P29350 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN6P29350 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN6P29350 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN6P29350 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN6P29350 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN6P29350 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN6P29350 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PTPN6P29350 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN6P29350 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN6P29350 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PTPN6P29350 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN6P29350 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN6P29350 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN6P29350 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN6P29350 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPN6P29350 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN6P29350 MIR6722-201ENST00000617286 78 ntBASIC20.96■□□□□ 0.95
PTPN6P29350 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN6P29350 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PTPN6P29350 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN6P29350 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN6P29350 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN6P29350 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN6P29350 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PTPN6P29350 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN6P29350 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN6P29350 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN6P29350 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PTPN6P29350 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN6P29350 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN6P29350 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN6P29350 MIR6724-1-201ENST00000616420 92 ntBASIC20.95■□□□□ 0.94
PTPN6P29350 MIR6724-2-201ENST00000616483 92 ntBASIC20.95■□□□□ 0.94
PTPN6P29350 MIR6724-4-201ENST00000617390 92 ntBASIC20.95■□□□□ 0.94
PTPN6P29350 MIR6724-3-201ENST00000622482 92 ntBASIC20.95■□□□□ 0.94
PTPN6P29350 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PTPN6P29350 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN6P29350 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN6P29350 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PTPN6P29350 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTPN6P29350 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN6P29350 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN6P29350 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN6P29350 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN6P29350 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN6P29350 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.93■□□□□ 0.94
PTPN6P29350 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN6P29350 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
PTPN6P29350 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN6P29350 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
PTPN6P29350 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN6P29350 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
PTPN6P29350 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN6P29350 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 AC092053.2-201ENST00000640557 1818 ntBASIC20.92■□□□□ 0.94
PTPN6P29350 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN6P29350 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN6P29350 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN6P29350 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN6P29350 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN6P29350 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPN6P29350 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN6P29350 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPN6P29350 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN6P29350 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PTPN6P29350 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PTPN6P29350 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PTPN6P29350 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms