Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 RPA135YPR010C 3612 nt3.09□□□□□ -1.92
CDC39P25655 CBP1YJL209W 1965 nt3.09□□□□□ -1.92
CDC39P25655 PTR2YKR093W 1806 nt3.09□□□□□ -1.92
CDC39P25655 HCA4YJL033W 2313 nt3.08□□□□□ -1.92
CDC39P25655 HOM2YDR158W 1098 nt3.08□□□□□ -1.92
CDC39P25655 RPS1BYML063W 768 nt3.08□□□□□ -1.92
CDC39P25655 IMP4YNL075W 873 nt3.08□□□□□ -1.92
CDC39P25655 VPS53YJL029C 2469 nt3.08□□□□□ -1.92
CDC39P25655 ALG2YGL065C 1512 nt3.08□□□□□ -1.92
CDC39P25655 GIP4YAL031C 2283 nt3.07□□□□□ -1.92
CDC39P25655 KIN28YDL108W 921 nt3.07□□□□□ -1.92
CDC39P25655 RPS13YDR064W 456 nt3.07□□□□□ -1.92
CDC39P25655 YKR104WYKR104W 921 nt3.07□□□□□ -1.92
CDC39P25655 NME1NME1 340 nt3.07□□□□□ -1.92
CDC39P25655 SLD2YKL108W 1362 nt3.07□□□□□ -1.92
CDC39P25655 VID27YNL212W 2349 nt3.07□□□□□ -1.92
CDC39P25655 CNM67YNL225C 1746 nt3.07□□□□□ -1.92
CDC39P25655 SPT23YKL020C 3249 nt3.07□□□□□ -1.92
CDC39P25655 TCO89YPL180W 2400 nt3.07□□□□□ -1.92
CDC39P25655 SNF11YDR073W 510 nt3.07□□□□□ -1.92
CDC39P25655 ORM1YGR038W 669 nt3.07□□□□□ -1.92
CDC39P25655 SMA1YPL027W 738 nt3.07□□□□□ -1.92
CDC39P25655 ATG23YLR431C 1362 nt3.07□□□□□ -1.92
CDC39P25655 STP4YDL048C 1473 nt3.06□□□□□ -1.92
CDC39P25655 RSM10YDR041W 612 nt3.06□□□□□ -1.92
CDC39P25655 PIR3YKL163W 978 nt3.06□□□□□ -1.92
CDC39P25655 ECM4YKR076W 1113 nt3.06□□□□□ -1.92
CDC39P25655 YBL059WYBL059W 582 nt3.06□□□□□ -1.92
CDC39P25655 OCA1YNL099C 717 nt3.06□□□□□ -1.92
CDC39P25655 OAF1YAL051W 3144 nt3.06□□□□□ -1.92
CDC39P25655 FRE7YOL152W 1863 nt3.06□□□□□ -1.92
CDC39P25655 REC104YHR157W 549 nt3.05□□□□□ -1.92
CDC39P25655 UBP7YIL156W 3216 nt3.05□□□□□ -1.92
CDC39P25655 AVT7YIL088C 1473 nt3.05□□□□□ -1.92
CDC39P25655 JIP5YPR169W 1479 nt3.05□□□□□ -1.92
CDC39P25655 RPS16BYDL083C 432 nt3.05□□□□□ -1.92
CDC39P25655 YGR051CYGR051C 324 nt3.05□□□□□ -1.92
CDC39P25655 PAU17YLL025W 375 nt3.05□□□□□ -1.92
CDC39P25655 YSF3YNL138W-A 258 nt3.05□□□□□ -1.92
CDC39P25655 PCL8YPL219W 1479 nt3.04□□□□□ -1.92
CDC39P25655 GPI10YGL142C 1851 nt3.04□□□□□ -1.92
CDC39P25655 ASI1YMR119W 1875 nt3.04□□□□□ -1.92
CDC39P25655 BMH1YER177W 804 nt3.04□□□□□ -1.92
CDC39P25655 PHA2YNL316C 1005 nt3.04□□□□□ -1.92
CDC39P25655 MED7YOL135C 669 nt3.04□□□□□ -1.92
CDC39P25655 PBS2YJL128C 2007 nt3.04□□□□□ -1.92
CDC39P25655 TED1YIL039W 1422 nt3.04□□□□□ -1.92
CDC39P25655 PEX7YDR142C 1128 nt3.04□□□□□ -1.92
CDC39P25655 MRPL7YDR237W 879 nt3.04□□□□□ -1.92
CDC39P25655 CAT5YOR125C 702 nt3.04□□□□□ -1.92
CDC39P25655 YHR177WYHR177W 1362 nt3.03□□□□□ -1.92
CDC39P25655 TCB3YML072C 4638 nt3.03□□□□□ -1.92
CDC39P25655 FAA1YOR317W 2103 nt3.03□□□□□ -1.92
CDC39P25655 GTF1YGR102C 552 nt3.03□□□□□ -1.92
CDC39P25655 ECM34YHL043W 513 nt3.03□□□□□ -1.92
CDC39P25655 RPA43YOR340C 981 nt3.03□□□□□ -1.92
CDC39P25655 TIM12YBR091C 330 nt3.03□□□□□ -1.92
CDC39P25655 ALA1YOR335C 2877 nt3.03□□□□□ -1.92
CDC39P25655 LCB5YLR260W 2064 nt3.03□□□□□ -1.92
CDC39P25655 SPT16YGL207W 3108 nt3.03□□□□□ -1.93
CDC39P25655 TDA11YHR159W 1515 nt3.02□□□□□ -1.93
CDC39P25655 tV(CAC)DtV(CAC)D 73 nt3.02□□□□□ -1.93
CDC39P25655 tV(CAC)HtV(CAC)H 73 nt3.02□□□□□ -1.93
CDC39P25655 YIL152WYIL152W 708 nt3.02□□□□□ -1.93
CDC39P25655 TOM40YMR203W 1164 nt3.02□□□□□ -1.93
CDC39P25655 LCB2YDR062W 1686 nt3.02□□□□□ -1.93
CDC39P25655 NUP133YKR082W 3474 nt3.02□□□□□ -1.93
CDC39P25655 CNL1YDR357C 369 nt3.02□□□□□ -1.93
CDC39P25655 YMR122W-AYMR122W-A 255 nt3.02□□□□□ -1.93
CDC39P25655 HAL1YPR005C 885 nt3.02□□□□□ -1.93
CDC39P25655 MRPL51YPR100W 423 nt3.02□□□□□ -1.93
CDC39P25655 PRP40YKL012W 1752 nt3.02□□□□□ -1.93
CDC39P25655 MCP2YLR253W 1710 nt3.02□□□□□ -1.93
CDC39P25655 FMP25YLR077W 1752 nt3.01□□□□□ -1.93
CDC39P25655 YGL074CYGL074C 327 nt3.01□□□□□ -1.93
CDC39P25655 ADD37YMR184W 597 nt3.01□□□□□ -1.93
CDC39P25655 OPI6YDL096C 327 nt3.01□□□□□ -1.93
CDC39P25655 AUR1YKL004W 1206 nt3.01□□□□□ -1.93
CDC39P25655 YMR084WYMR084W 789 nt3.01□□□□□ -1.93
CDC39P25655 YNL320WYNL320W 855 nt3.01□□□□□ -1.93
CDC39P25655 CKS1YBR135W 453 nt3.01□□□□□ -1.93
CDC39P25655 SPT6YGR116W 4356 nt3□□□□□ -1.93
CDC39P25655 MDM30YLR368W 1797 nt3□□□□□ -1.93
CDC39P25655 SBE2YDR351W 2595 nt3□□□□□ -1.93
CDC39P25655 ELF1YKL160W 438 nt3□□□□□ -1.93
CDC39P25655 NOP13YNL175C 1212 nt3□□□□□ -1.93
CDC39P25655 HMG1YML075C 3165 nt3□□□□□ -1.93
CDC39P25655 GPI13YLL031C 3054 nt3□□□□□ -1.93
CDC39P25655 FMP30YPL103C 1407 nt3□□□□□ -1.93
CDC39P25655 TRS120YDR407C 3870 nt2.99□□□□□ -1.93
CDC39P25655 GTT1YIR038C 705 nt2.99□□□□□ -1.93
CDC39P25655 YOR292CYOR292C 930 nt2.99□□□□□ -1.93
CDC39P25655 YBR141W-AYBR141W-A 96 nt2.99□□□□□ -1.93
CDC39P25655 RPS9BYBR189W 588 nt2.99□□□□□ -1.93
CDC39P25655 GLN4YOR168W 2430 nt2.99□□□□□ -1.93
CDC39P25655 CHA4YLR098C 1947 nt2.99□□□□□ -1.93
CDC39P25655 DTD1YDL219W 453 nt2.99□□□□□ -1.93
CDC39P25655 HIM1YDR317W 1245 nt2.99□□□□□ -1.93
CDC39P25655 OPY2YPR075C 1083 nt2.99□□□□□ -1.93
CDC39P25655 RSF2YJR127C 4143 nt2.99□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms