Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.35■□□□□ 0.85
NR4A1P22736 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR4A1P22736 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
NR4A1P22736 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR4A1P22736 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.34■□□□□ 0.85
NR4A1P22736 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR4A1P22736 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.34■□□□□ 0.85
NR4A1P22736 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR4A1P22736 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.34■□□□□ 0.85
NR4A1P22736 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR4A1P22736 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR4A1P22736 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NR4A1P22736 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NR4A1P22736 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
NR4A1P22736 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NR4A1P22736 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NR4A1P22736 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.33■□□□□ 0.85
NR4A1P22736 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NR4A1P22736 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NR4A1P22736 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.33■□□□□ 0.85
NR4A1P22736 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.33■□□□□ 0.84
NR4A1P22736 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NR4A1P22736 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NR4A1P22736 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
NR4A1P22736 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.32■□□□□ 0.84
NR4A1P22736 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.32■□□□□ 0.84
NR4A1P22736 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.32■□□□□ 0.84
NR4A1P22736 THA1P-201ENST00000590384 1145 ntBASIC20.32■□□□□ 0.84
NR4A1P22736 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR4A1P22736 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR4A1P22736 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NR4A1P22736 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR4A1P22736 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NR4A1P22736 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR4A1P22736 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.31■□□□□ 0.84
NR4A1P22736 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 AC120024.1-201ENST00000562672 995 ntBASIC20.31■□□□□ 0.84
NR4A1P22736 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.31■□□□□ 0.84
NR4A1P22736 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.31■□□□□ 0.84
NR4A1P22736 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
NR4A1P22736 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NR4A1P22736 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NR4A1P22736 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.3■□□□□ 0.84
NR4A1P22736 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NR4A1P22736 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A1P22736 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.3■□□□□ 0.84
NR4A1P22736 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.3■□□□□ 0.84
NR4A1P22736 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A1P22736 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A1P22736 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A1P22736 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.3■□□□□ 0.84
NR4A1P22736 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A1P22736 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A1P22736 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A1P22736 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.29■□□□□ 0.84
NR4A1P22736 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A1P22736 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.29■□□□□ 0.84
NR4A1P22736 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A1P22736 AC011551.1-201ENST00000614101 683 ntBASIC20.29■□□□□ 0.84
NR4A1P22736 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.29■□□□□ 0.84
NR4A1P22736 AL035685.1-201ENST00000636663 812 ntBASIC20.29■□□□□ 0.84
NR4A1P22736 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A1P22736 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NR4A1P22736 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A1P22736 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.28■□□□□ 0.84
NR4A1P22736 C11orf96-202ENST00000528572 1834 ntBASIC20.28■□□□□ 0.84
NR4A1P22736 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NR4A1P22736 AC009299.2-201ENST00000482477 511 ntBASIC20.28■□□□□ 0.84
NR4A1P22736 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NR4A1P22736 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.28■□□□□ 0.84
NR4A1P22736 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NR4A1P22736 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.28■□□□□ 0.84
NR4A1P22736 AC026310.3-201ENST00000625186 2373 ntBASIC20.28■□□□□ 0.84
NR4A1P22736 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A1P22736 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms