Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TNFAIP3P21580 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFAIP3P21580 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TNFAIP3P21580 LINC00565-201ENST00000562710 2331 ntBASIC23.59■■□□□ 1.37
TNFAIP3P21580 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFAIP3P21580 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.58■■□□□ 1.37
TNFAIP3P21580 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.58■■□□□ 1.37
TNFAIP3P21580 UNC93B8-201ENST00000511903 705 ntBASIC23.58■■□□□ 1.37
TNFAIP3P21580 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFAIP3P21580 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFAIP3P21580 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFAIP3P21580 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.57■■□□□ 1.36
TNFAIP3P21580 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 MIR6724-1-201ENST00000616420 92 ntBASIC23.57■■□□□ 1.36
TNFAIP3P21580 MIR6724-2-201ENST00000616483 92 ntBASIC23.57■■□□□ 1.36
TNFAIP3P21580 MIR6724-4-201ENST00000617390 92 ntBASIC23.57■■□□□ 1.36
TNFAIP3P21580 MIR6724-3-201ENST00000622482 92 ntBASIC23.57■■□□□ 1.36
TNFAIP3P21580 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.57■■□□□ 1.36
TNFAIP3P21580 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TNFAIP3P21580 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TNFAIP3P21580 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 C17orf82-201ENST00000623772 1530 ntBASIC23.56■■□□□ 1.36
TNFAIP3P21580 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFAIP3P21580 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.56■■□□□ 1.36
TNFAIP3P21580 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TNFAIP3P21580 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
TNFAIP3P21580 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.55■■□□□ 1.36
TNFAIP3P21580 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
TNFAIP3P21580 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TNFAIP3P21580 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TNFAIP3P21580 AC080038.3-201ENST00000623346 1952 ntBASIC23.54■■□□□ 1.36
TNFAIP3P21580 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
TNFAIP3P21580 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.54■■□□□ 1.36
TNFAIP3P21580 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TNFAIP3P21580 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
TNFAIP3P21580 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.54■■□□□ 1.36
TNFAIP3P21580 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFAIP3P21580 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.54■■□□□ 1.36
TNFAIP3P21580 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFAIP3P21580 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TNFAIP3P21580 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.53■■□□□ 1.36
TNFAIP3P21580 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.53■■□□□ 1.36
TNFAIP3P21580 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TNFAIP3P21580 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.53■■□□□ 1.36
TNFAIP3P21580 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFAIP3P21580 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TNFAIP3P21580 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFAIP3P21580 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFAIP3P21580 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.53■■□□□ 1.36
TNFAIP3P21580 AC139530.1-201ENST00000575312 1977 ntBASIC23.52■■□□□ 1.36
TNFAIP3P21580 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFAIP3P21580 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TNFAIP3P21580 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFAIP3P21580 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
TNFAIP3P21580 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.52■■□□□ 1.36
TNFAIP3P21580 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.52■■□□□ 1.36
TNFAIP3P21580 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms