Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRMP19623 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.24■□□□□ 0.67
SRMP19623 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.24■□□□□ 0.67
SRMP19623 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.23■□□□□ 0.67
SRMP19623 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRMP19623 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRMP19623 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRMP19623 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRMP19623 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRMP19623 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SRMP19623 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SRMP19623 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRMP19623 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SRMP19623 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.21■□□□□ 0.67
SRMP19623 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.21■□□□□ 0.67
SRMP19623 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SRMP19623 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SRMP19623 FAM99A-202ENST00000538190 1989 ntBASIC19.21■□□□□ 0.67
SRMP19623 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
SRMP19623 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SRMP19623 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.21■□□□□ 0.67
SRMP19623 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 AC139795.1-202ENST00000500444 432 ntBASIC19.21■□□□□ 0.67
SRMP19623 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.21■□□□□ 0.67
SRMP19623 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.21■□□□□ 0.67
SRMP19623 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRMP19623 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
SRMP19623 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SRMP19623 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SRMP19623 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.2■□□□□ 0.66
SRMP19623 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SRMP19623 KRT18P24-201ENST00000344739 1156 ntBASIC19.2■□□□□ 0.66
SRMP19623 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SRMP19623 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRMP19623 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SRMP19623 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SRMP19623 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SRMP19623 AC010542.4-201ENST00000563151 1910 ntBASIC19.19■□□□□ 0.66
SRMP19623 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SRMP19623 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 KRT18P60-201ENST00000312876 1297 ntBASIC19.19■□□□□ 0.66
SRMP19623 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.19■□□□□ 0.66
SRMP19623 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.19■□□□□ 0.66
SRMP19623 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SRMP19623 MIR4281-201ENST00000580852 62 ntBASIC19.19■□□□□ 0.66
SRMP19623 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.19■□□□□ 0.66
SRMP19623 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SRMP19623 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRMP19623 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SRMP19623 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRMP19623 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.18■□□□□ 0.66
SRMP19623 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SRMP19623 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRMP19623 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRMP19623 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRMP19623 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRMP19623 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SRMP19623 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
SRMP19623 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SRMP19623 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms