Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATF4P18848 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ATF4P18848 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATF4P18848 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATF4P18848 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.28■□□□□ 0.52
ATF4P18848 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATF4P18848 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATF4P18848 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.27■□□□□ 0.52
ATF4P18848 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.27■□□□□ 0.52
ATF4P18848 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.27■□□□□ 0.52
ATF4P18848 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF4P18848 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
ATF4P18848 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATF4P18848 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
ATF4P18848 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.27■□□□□ 0.51
ATF4P18848 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.27■□□□□ 0.51
ATF4P18848 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.27■□□□□ 0.51
ATF4P18848 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.27■□□□□ 0.51
ATF4P18848 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATF4P18848 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.27■□□□□ 0.51
ATF4P18848 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.26■□□□□ 0.51
ATF4P18848 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATF4P18848 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATF4P18848 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.26■□□□□ 0.51
ATF4P18848 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.26■□□□□ 0.51
ATF4P18848 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.26■□□□□ 0.51
ATF4P18848 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.26■□□□□ 0.51
ATF4P18848 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.26■□□□□ 0.51
ATF4P18848 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATF4P18848 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.25■□□□□ 0.51
ATF4P18848 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.25■□□□□ 0.51
ATF4P18848 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ATF4P18848 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ATF4P18848 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATF4P18848 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
ATF4P18848 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATF4P18848 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.24■□□□□ 0.51
ATF4P18848 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATF4P18848 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF4P18848 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATF4P18848 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF4P18848 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF4P18848 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF4P18848 AC022413.1-201ENST00000624602 984 ntBASIC18.24■□□□□ 0.51
ATF4P18848 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATF4P18848 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
ATF4P18848 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF4P18848 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF4P18848 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF4P18848 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF4P18848 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF4P18848 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.23■□□□□ 0.51
ATF4P18848 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
ATF4P18848 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATF4P18848 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ATF4P18848 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
ATF4P18848 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF4P18848 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATF4P18848 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ATF4P18848 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.23■□□□□ 0.51
ATF4P18848 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF4P18848 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ATF4P18848 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF4P18848 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF4P18848 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF4P18848 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATF4P18848 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms