Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.84■□□□□ 0.45
DEFA4P12838 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.84■□□□□ 0.45
DEFA4P12838 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DEFA4P12838 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.84■□□□□ 0.45
DEFA4P12838 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.84■□□□□ 0.45
DEFA4P12838 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.84■□□□□ 0.45
DEFA4P12838 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DEFA4P12838 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
DEFA4P12838 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
DEFA4P12838 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEFA4P12838 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
DEFA4P12838 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEFA4P12838 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DEFA4P12838 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DEFA4P12838 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DEFA4P12838 AL137060.1-201ENST00000618151 2648 ntBASIC17.84■□□□□ 0.45
DEFA4P12838 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DEFA4P12838 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DEFA4P12838 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.83■□□□□ 0.45
DEFA4P12838 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.83■□□□□ 0.45
DEFA4P12838 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEFA4P12838 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEFA4P12838 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.83■□□□□ 0.44
DEFA4P12838 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEFA4P12838 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.83■□□□□ 0.44
DEFA4P12838 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DEFA4P12838 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.82■□□□□ 0.44
DEFA4P12838 KRT125P-201ENST00000546827 989 ntBASIC17.82■□□□□ 0.44
DEFA4P12838 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.82■□□□□ 0.44
DEFA4P12838 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DEFA4P12838 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.82■□□□□ 0.44
DEFA4P12838 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEFA4P12838 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DEFA4P12838 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DEFA4P12838 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.81■□□□□ 0.44
DEFA4P12838 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DEFA4P12838 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DEFA4P12838 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.81■□□□□ 0.44
DEFA4P12838 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEFA4P12838 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DEFA4P12838 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.8■□□□□ 0.44
DEFA4P12838 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.8■□□□□ 0.44
DEFA4P12838 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.8■□□□□ 0.44
DEFA4P12838 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 SNX5-217ENST00000606557 1087 ntBASIC17.8■□□□□ 0.44
DEFA4P12838 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DEFA4P12838 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 ECEL1P1-201ENST00000373592 1742 ntBASIC17.8■□□□□ 0.44
DEFA4P12838 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 AL024507.2-201ENST00000606070 2574 ntBASIC17.8■□□□□ 0.44
DEFA4P12838 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEFA4P12838 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.79■□□□□ 0.44
DEFA4P12838 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
DEFA4P12838 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.79■□□□□ 0.44
DEFA4P12838 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DEFA4P12838 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.79■□□□□ 0.44
DEFA4P12838 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
DEFA4P12838 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DEFA4P12838 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DEFA4P12838 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
DEFA4P12838 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DEFA4P12838 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms