Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.96■□□□□ 0.95
TPRP12270 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.96■□□□□ 0.95
TPRP12270 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPRP12270 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.96■□□□□ 0.95
TPRP12270 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPRP12270 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPRP12270 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPRP12270 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.96■□□□□ 0.95
TPRP12270 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPRP12270 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.96■□□□□ 0.95
TPRP12270 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.96■□□□□ 0.95
TPRP12270 AC141586.4-201ENST00000624558 1573 ntBASIC20.96■□□□□ 0.95
TPRP12270 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TPRP12270 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPRP12270 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.95■□□□□ 0.94
TPRP12270 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TPRP12270 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.95■□□□□ 0.94
TPRP12270 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
TPRP12270 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.95■□□□□ 0.94
TPRP12270 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.95■□□□□ 0.94
TPRP12270 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.95■□□□□ 0.94
TPRP12270 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
TPRP12270 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TPRP12270 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRP12270 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TPRP12270 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TPRP12270 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.94■□□□□ 0.94
TPRP12270 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.94■□□□□ 0.94
TPRP12270 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TPRP12270 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRP12270 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.94■□□□□ 0.94
TPRP12270 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.94■□□□□ 0.94
TPRP12270 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.94■□□□□ 0.94
TPRP12270 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.94■□□□□ 0.94
TPRP12270 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.94■□□□□ 0.94
TPRP12270 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.93■□□□□ 0.94
TPRP12270 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPRP12270 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPRP12270 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.93■□□□□ 0.94
TPRP12270 AP004609.3-201ENST00000610705 1884 ntBASIC20.93■□□□□ 0.94
TPRP12270 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRP12270 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPRP12270 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPRP12270 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TPRP12270 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRP12270 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPRP12270 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.93■□□□□ 0.94
TPRP12270 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TPRP12270 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.93■□□□□ 0.94
TPRP12270 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.93■□□□□ 0.94
TPRP12270 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TPRP12270 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TPRP12270 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.92■□□□□ 0.94
TPRP12270 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRP12270 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TPRP12270 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.91■□□□□ 0.94
TPRP12270 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPRP12270 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TPRP12270 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRP12270 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPRP12270 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.91■□□□□ 0.94
TPRP12270 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.91■□□□□ 0.94
TPRP12270 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.91■□□□□ 0.94
TPRP12270 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.91■□□□□ 0.94
TPRP12270 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRP12270 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRP12270 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TPRP12270 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.9■□□□□ 0.94
TPRP12270 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRP12270 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.9■□□□□ 0.94
TPRP12270 UBE2DNL-204ENST00000602536 740 ntBASIC20.9■□□□□ 0.94
TPRP12270 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRP12270 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRP12270 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.9■□□□□ 0.94
TPRP12270 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRP12270 UBE2SP1-201ENST00000450587 669 ntBASIC20.9■□□□□ 0.94
TPRP12270 OR2I1P-207ENST00000453522 948 ntBASIC20.9■□□□□ 0.94
TPRP12270 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.9■□□□□ 0.94
TPRP12270 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPRP12270 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPRP12270 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.89■□□□□ 0.94
TPRP12270 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPRP12270 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.89■□□□□ 0.94
TPRP12270 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.89■□□□□ 0.94
TPRP12270 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPRP12270 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.89■□□□□ 0.94
TPRP12270 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TPRP12270 MKRN4P-201ENST00000444706 1521 ntBASIC20.89■□□□□ 0.94
TPRP12270 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.89■□□□□ 0.94
TPRP12270 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms