Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.25■□□□□ 0.35
CD28P10747 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.25■□□□□ 0.35
CD28P10747 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.25■□□□□ 0.35
CD28P10747 AC123595.1-201ENST00000440769 1046 ntBASIC17.25■□□□□ 0.35
CD28P10747 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.25■□□□□ 0.35
CD28P10747 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 IKBKGP1-201ENST00000612193 1073 ntBASIC17.25■□□□□ 0.35
CD28P10747 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CD28P10747 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CD28P10747 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.24■□□□□ 0.35
CD28P10747 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CD28P10747 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.24■□□□□ 0.35
CD28P10747 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
CD28P10747 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CD28P10747 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.24■□□□□ 0.35
CD28P10747 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CD28P10747 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.24■□□□□ 0.35
CD28P10747 AC022517.1-201ENST00000592429 346 ntBASIC17.24■□□□□ 0.35
CD28P10747 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.24■□□□□ 0.35
CD28P10747 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD28P10747 LINC00543-201ENST00000567234 1845 ntBASIC17.24■□□□□ 0.35
CD28P10747 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.23■□□□□ 0.35
CD28P10747 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.23■□□□□ 0.35
CD28P10747 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CD28P10747 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.23■□□□□ 0.35
CD28P10747 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.23■□□□□ 0.35
CD28P10747 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 AP005435.1-201ENST00000529293 1178 ntBASIC17.23■□□□□ 0.35
CD28P10747 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.23■□□□□ 0.35
CD28P10747 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.23■□□□□ 0.35
CD28P10747 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.23■□□□□ 0.35
CD28P10747 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.23■□□□□ 0.35
CD28P10747 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD28P10747 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CD28P10747 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD28P10747 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD28P10747 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.22■□□□□ 0.35
CD28P10747 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD28P10747 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD28P10747 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.22■□□□□ 0.35
CD28P10747 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.22■□□□□ 0.35
CD28P10747 CCDC92B-201ENST00000575506 885 ntBASIC17.22■□□□□ 0.35
CD28P10747 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.22■□□□□ 0.35
CD28P10747 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CD28P10747 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD28P10747 AC004812.2-201ENST00000611079 2094 ntBASIC17.22■□□□□ 0.35
CD28P10747 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CD28P10747 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD28P10747 AC093323.1-202ENST00000635031 2045 ntBASIC17.21■□□□□ 0.35
CD28P10747 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.21■□□□□ 0.35
CD28P10747 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.21■□□□□ 0.35
CD28P10747 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.21■□□□□ 0.35
CD28P10747 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.21■□□□□ 0.35
CD28P10747 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD28P10747 AC105233.4-201ENST00000642045 216 ntBASIC17.21■□□□□ 0.35
CD28P10747 AC079630.1-202ENST00000618127 1840 ntBASIC17.21■□□□□ 0.35
CD28P10747 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD28P10747 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.2■□□□□ 0.34
CD28P10747 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.2■□□□□ 0.34
CD28P10747 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.2■□□□□ 0.34
CD28P10747 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.2■□□□□ 0.34
CD28P10747 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD28P10747 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms