Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 AC242852.2-201ENST00000615738 1807 ntBASIC18.72■□□□□ 0.59
ZNF728P0DKX0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 KRT16P3-201ENST00000439127 1283 ntBASIC18.72■□□□□ 0.59
ZNF728P0DKX0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF728P0DKX0 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.71■□□□□ 0.59
ZNF728P0DKX0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF728P0DKX0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF728P0DKX0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF728P0DKX0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
ZNF728P0DKX0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 MIR6724-1-201ENST00000616420 92 ntBASIC18.69■□□□□ 0.58
ZNF728P0DKX0 MIR6724-2-201ENST00000616483 92 ntBASIC18.69■□□□□ 0.58
ZNF728P0DKX0 MIR6724-4-201ENST00000617390 92 ntBASIC18.69■□□□□ 0.58
ZNF728P0DKX0 MIR6724-3-201ENST00000622482 92 ntBASIC18.69■□□□□ 0.58
ZNF728P0DKX0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF728P0DKX0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.68■□□□□ 0.58
ZNF728P0DKX0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF728P0DKX0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF728P0DKX0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF728P0DKX0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms