Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNYL3P0C7X3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL3P0C7X3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 TSPY26P-201ENST00000476365 1326 ntBASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 CLDN5-201ENST00000403084 2357 ntBASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCNYL3P0C7X3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 FP325331.1-202ENST00000623531 1380 ntBASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 SLC47A1P1-202ENST00000449666 945 ntBASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 AL162430.1-201ENST00000480705 870 ntBASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 AC079834.2-201ENST00000609776 1949 ntBASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL3P0C7X3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNYL3P0C7X3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNYL3P0C7X3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 AC133637.1-201ENST00000624115 1537 ntBASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCNYL3P0C7X3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL3P0C7X3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CCNYL3P0C7X3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms