Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.16■□□□□ 0.82
P04436 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
P04436 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.16■□□□□ 0.82
P04436 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.16■□□□□ 0.82
P04436 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04436 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04436 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04436 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04436 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04436 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04436 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04436 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P04436 RARRES2P6-201ENST00000567333 442 ntBASIC20.15■□□□□ 0.82
P04436 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
P04436 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.15■□□□□ 0.82
P04436 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04436 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04436 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
P04436 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.15■□□□□ 0.82
P04436 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
P04436 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
P04436 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.14■□□□□ 0.81
P04436 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04436 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.14■□□□□ 0.81
P04436 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.14■□□□□ 0.81
P04436 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04436 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
P04436 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.14■□□□□ 0.81
P04436 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04436 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
P04436 AC068587.7-201ENST00000641602 218 ntBASIC20.14■□□□□ 0.81
P04436 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04436 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04436 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P04436 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
P04436 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.13■□□□□ 0.81
P04436 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04436 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
P04436 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04436 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.13■□□□□ 0.81
P04436 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.13■□□□□ 0.81
P04436 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P04436 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.13■□□□□ 0.81
P04436 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.13■□□□□ 0.81
P04436 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04436 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P04436 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
P04436 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.12■□□□□ 0.81
P04436 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.12■□□□□ 0.81
P04436 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.12■□□□□ 0.81
P04436 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.12■□□□□ 0.81
P04436 AC087239.1-201ENST00000622671 572 ntBASIC20.12■□□□□ 0.81
P04436 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04436 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
P04436 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
P04436 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
P04436 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.11■□□□□ 0.81
P04436 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.11■□□□□ 0.81
P04436 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
P04436 MIR572-201ENST00000384983 95 ntBASIC20.11■□□□□ 0.81
P04436 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
P04436 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.11■□□□□ 0.81
P04436 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.11■□□□□ 0.81
P04436 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
P04436 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
P04436 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04436 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.11■□□□□ 0.81
P04436 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.1■□□□□ 0.81
P04436 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.1■□□□□ 0.81
P04436 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.1■□□□□ 0.81
P04436 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
P04436 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.1■□□□□ 0.81
P04436 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
P04436 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04436 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
P04436 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04436 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
P04436 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P04436 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms