Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.57■■□□□ 1.52
CD4P01730 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.57■■□□□ 1.52
CD4P01730 AC137761.2-201ENST00000561729 223 ntBASIC24.57■■□□□ 1.52
CD4P01730 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.57■■□□□ 1.52
CD4P01730 AC145350.3-201ENST00000569033 163 ntBASIC24.57■■□□□ 1.52
CD4P01730 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CD4P01730 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.57■■□□□ 1.52
CD4P01730 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CD4P01730 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CD4P01730 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CD4P01730 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CD4P01730 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.56■■□□□ 1.52
CD4P01730 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.56■■□□□ 1.52
CD4P01730 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CD4P01730 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.56■■□□□ 1.52
CD4P01730 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.56■■□□□ 1.52
CD4P01730 AC016769.1-201ENST00000409132 1010 ntBASIC24.56■■□□□ 1.52
CD4P01730 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CD4P01730 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.56■■□□□ 1.52
CD4P01730 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CD4P01730 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CD4P01730 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CD4P01730 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.55■■□□□ 1.52
CD4P01730 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.55■■□□□ 1.52
CD4P01730 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.55■■□□□ 1.52
CD4P01730 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.55■■□□□ 1.52
CD4P01730 AP004607.4-201ENST00000530158 1459 ntBASIC24.55■■□□□ 1.52
CD4P01730 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CD4P01730 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CD4P01730 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CD4P01730 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CD4P01730 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CD4P01730 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.54■■□□□ 1.52
CD4P01730 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CD4P01730 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.54■■□□□ 1.52
CD4P01730 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CD4P01730 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.54■■□□□ 1.52
CD4P01730 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 LINC01529-204ENST00000636474 1715 ntBASIC24.53■■□□□ 1.52
CD4P01730 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.53■■□□□ 1.52
CD4P01730 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.53■■□□□ 1.52
CD4P01730 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.53■■□□□ 1.52
CD4P01730 AC144652.1-201ENST00000609974 1624 ntBASIC24.53■■□□□ 1.52
CD4P01730 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CD4P01730 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CD4P01730 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.52■■□□□ 1.52
CD4P01730 AC026185.1-201ENST00000445748 174 ntBASIC24.52■■□□□ 1.52
CD4P01730 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.52■■□□□ 1.52
CD4P01730 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.52■■□□□ 1.52
CD4P01730 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CD4P01730 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CD4P01730 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD4P01730 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD4P01730 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.51■■□□□ 1.51
CD4P01730 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.51■■□□□ 1.51
CD4P01730 AC104771.1-201ENST00000603335 964 ntBASIC24.51■■□□□ 1.51
CD4P01730 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
CD4P01730 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.51■■□□□ 1.51
CD4P01730 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.51■■□□□ 1.51
CD4P01730 LINC00543-201ENST00000567234 1845 ntBASIC24.51■■□□□ 1.51
CD4P01730 AL139125.2-201ENST00000623134 1869 ntBASIC24.51■■□□□ 1.51
CD4P01730 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CD4P01730 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD4P01730 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CD4P01730 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CD4P01730 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CD4P01730 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.5■■□□□ 1.51
CD4P01730 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CD4P01730 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.5■■□□□ 1.51
CD4P01730 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.5■■□□□ 1.51
CD4P01730 AC004854.2-201ENST00000608450 1441 ntBASIC24.5■■□□□ 1.51
CD4P01730 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.5■■□□□ 1.51
CD4P01730 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CD4P01730 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CD4P01730 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.49■■□□□ 1.51
CD4P01730 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.49■■□□□ 1.51
CD4P01730 LINC01124-201ENST00000409786 2117 ntBASIC24.49■■□□□ 1.51
CD4P01730 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.49■■□□□ 1.51
CD4P01730 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.49■■□□□ 1.51
CD4P01730 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.49■■□□□ 1.51
CD4P01730 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.49■■□□□ 1.51
CD4P01730 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD4P01730 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms