Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SCAF4O95104 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.96■□□□□ 0.47
SCAF4O95104 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SCAF4O95104 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SCAF4O95104 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.96■□□□□ 0.47
SCAF4O95104 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCAF4O95104 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SCAF4O95104 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SCAF4O95104 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.95■□□□□ 0.46
SCAF4O95104 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
SCAF4O95104 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.95■□□□□ 0.46
SCAF4O95104 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.95■□□□□ 0.46
SCAF4O95104 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SCAF4O95104 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCAF4O95104 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAF4O95104 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAF4O95104 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAF4O95104 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.94■□□□□ 0.46
SCAF4O95104 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.94■□□□□ 0.46
SCAF4O95104 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAF4O95104 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAF4O95104 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAF4O95104 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.94■□□□□ 0.46
SCAF4O95104 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAF4O95104 AL121603.2-201ENST00000557373 2117 ntBASIC17.93■□□□□ 0.46
SCAF4O95104 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SCAF4O95104 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAF4O95104 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAF4O95104 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAF4O95104 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAF4O95104 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAF4O95104 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCAF4O95104 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAF4O95104 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAF4O95104 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAF4O95104 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 KRT8P33-201ENST00000508125 1423 ntBASIC17.92■□□□□ 0.46
SCAF4O95104 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.92■□□□□ 0.46
SCAF4O95104 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.92■□□□□ 0.46
SCAF4O95104 AC011551.1-201ENST00000614101 683 ntBASIC17.92■□□□□ 0.46
SCAF4O95104 AC074183.2-201ENST00000623112 922 ntBASIC17.92■□□□□ 0.46
SCAF4O95104 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAF4O95104 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SCAF4O95104 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.91■□□□□ 0.46
SCAF4O95104 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 AC092053.2-201ENST00000640557 1818 ntBASIC17.91■□□□□ 0.46
SCAF4O95104 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.91■□□□□ 0.46
SCAF4O95104 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCAF4O95104 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCAF4O95104 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCAF4O95104 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.91■□□□□ 0.46
SCAF4O95104 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.91■□□□□ 0.46
SCAF4O95104 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCAF4O95104 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.91■□□□□ 0.46
SCAF4O95104 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.91■□□□□ 0.46
SCAF4O95104 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCAF4O95104 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms