Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.15■□□□□ 0.98
LCMT2O60294 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
LCMT2O60294 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCMT2O60294 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LCMT2O60294 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LCMT2O60294 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.15■□□□□ 0.98
LCMT2O60294 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LCMT2O60294 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.14■□□□□ 0.98
LCMT2O60294 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
LCMT2O60294 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
LCMT2O60294 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
LCMT2O60294 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.14■□□□□ 0.98
LCMT2O60294 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LCMT2O60294 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.14■□□□□ 0.97
LCMT2O60294 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.14■□□□□ 0.97
LCMT2O60294 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.14■□□□□ 0.97
LCMT2O60294 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LCMT2O60294 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.14■□□□□ 0.97
LCMT2O60294 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LCMT2O60294 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.14■□□□□ 0.97
LCMT2O60294 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCMT2O60294 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
LCMT2O60294 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCMT2O60294 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCMT2O60294 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.13■□□□□ 0.97
LCMT2O60294 AC135279.3-201ENST00000610945 1311 ntBASIC21.13■□□□□ 0.97
LCMT2O60294 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCMT2O60294 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCMT2O60294 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCMT2O60294 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.13■□□□□ 0.97
LCMT2O60294 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.13■□□□□ 0.97
LCMT2O60294 AC106739.1-201ENST00000617035 715 ntBASIC21.13■□□□□ 0.97
LCMT2O60294 AC136469.2-201ENST00000623944 1028 ntBASIC21.13■□□□□ 0.97
LCMT2O60294 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.12■□□□□ 0.97
LCMT2O60294 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.12■□□□□ 0.97
LCMT2O60294 AC133561.1-201ENST00000568600 2415 ntBASIC21.12■□□□□ 0.97
LCMT2O60294 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.12■□□□□ 0.97
LCMT2O60294 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCMT2O60294 MIR4767-201ENST00000582827 78 ntBASIC21.12■□□□□ 0.97
LCMT2O60294 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
LCMT2O60294 AL139246.5-201ENST00000606645 996 ntBASIC21.12■□□□□ 0.97
LCMT2O60294 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.12■□□□□ 0.97
LCMT2O60294 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.12■□□□□ 0.97
LCMT2O60294 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.11■□□□□ 0.97
LCMT2O60294 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
LCMT2O60294 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.11■□□□□ 0.97
LCMT2O60294 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.11■□□□□ 0.97
LCMT2O60294 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.11■□□□□ 0.97
LCMT2O60294 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.11■□□□□ 0.97
LCMT2O60294 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LCMT2O60294 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCMT2O60294 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.11■□□□□ 0.97
LCMT2O60294 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
LCMT2O60294 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.1■□□□□ 0.97
LCMT2O60294 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LCMT2O60294 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LCMT2O60294 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LCMT2O60294 AC010525.1-201ENST00000585559 441 ntBASIC21.1■□□□□ 0.97
LCMT2O60294 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LCMT2O60294 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCMT2O60294 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
LCMT2O60294 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
LCMT2O60294 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LCMT2O60294 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.09■□□□□ 0.97
LCMT2O60294 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
LCMT2O60294 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.09■□□□□ 0.97
LCMT2O60294 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LCMT2O60294 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.09■□□□□ 0.97
LCMT2O60294 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LCMT2O60294 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LCMT2O60294 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.08■□□□□ 0.97
LCMT2O60294 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
LCMT2O60294 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.08■□□□□ 0.97
LCMT2O60294 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.08■□□□□ 0.96
LCMT2O60294 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LCMT2O60294 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LCMT2O60294 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LCMT2O60294 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.07■□□□□ 0.96
LCMT2O60294 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.07■□□□□ 0.96
LCMT2O60294 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.07■□□□□ 0.96
LCMT2O60294 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms