Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PDE6DO43924 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDE6DO43924 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6DO43924 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6DO43924 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6DO43924 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6DO43924 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6DO43924 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6DO43924 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PDE6DO43924 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDE6DO43924 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE6DO43924 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6DO43924 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6DO43924 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6DO43924 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 AC087742.1-201ENST00000575880 1738 ntBASIC17.08■□□□□ 0.32
PDE6DO43924 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDE6DO43924 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6DO43924 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6DO43924 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PDE6DO43924 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6DO43924 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 AC060814.1-201ENST00000554326 538 ntBASIC17.07■□□□□ 0.32
PDE6DO43924 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDE6DO43924 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6DO43924 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6DO43924 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6DO43924 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 AL353803.4-201ENST00000565882 1934 ntBASIC17.06■□□□□ 0.32
PDE6DO43924 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6DO43924 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDE6DO43924 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PDE6DO43924 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6DO43924 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6DO43924 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDE6DO43924 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6DO43924 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6DO43924 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6DO43924 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.05■□□□□ 0.32
PDE6DO43924 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6DO43924 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6DO43924 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
PDE6DO43924 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6DO43924 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6DO43924 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6DO43924 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6DO43924 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PDE6DO43924 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6DO43924 LINC01521-201ENST00000504184 1943 ntBASIC17.04■□□□□ 0.32
PDE6DO43924 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6DO43924 AC244015.2-201ENST00000616358 1861 ntBASIC17.04■□□□□ 0.32
PDE6DO43924 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms