Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
IDH3BO43837 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IDH3BO43837 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.11■□□□□ 0.81
IDH3BO43837 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IDH3BO43837 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.11■□□□□ 0.81
IDH3BO43837 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.11■□□□□ 0.81
IDH3BO43837 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IDH3BO43837 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IDH3BO43837 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IDH3BO43837 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
IDH3BO43837 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
IDH3BO43837 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
IDH3BO43837 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IDH3BO43837 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
IDH3BO43837 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
IDH3BO43837 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 AL137060.1-201ENST00000618151 2648 ntBASIC20.1■□□□□ 0.81
IDH3BO43837 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.1■□□□□ 0.81
IDH3BO43837 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 LINC00526-201ENST00000581067 1875 ntBASIC20.1■□□□□ 0.81
IDH3BO43837 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.1■□□□□ 0.81
IDH3BO43837 YBX1P4-201ENST00000392794 808 ntBASIC20.1■□□□□ 0.81
IDH3BO43837 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.1■□□□□ 0.81
IDH3BO43837 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.1■□□□□ 0.81
IDH3BO43837 SNX5-217ENST00000606557 1087 ntBASIC20.1■□□□□ 0.81
IDH3BO43837 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
IDH3BO43837 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.1■□□□□ 0.81
IDH3BO43837 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IDH3BO43837 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IDH3BO43837 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IDH3BO43837 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IDH3BO43837 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
IDH3BO43837 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IDH3BO43837 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
IDH3BO43837 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IDH3BO43837 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IDH3BO43837 AC103834.1-201ENST00000520383 144 ntBASIC20.09■□□□□ 0.81
IDH3BO43837 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.09■□□□□ 0.81
IDH3BO43837 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.09■□□□□ 0.81
IDH3BO43837 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.09■□□□□ 0.81
IDH3BO43837 GUSBP5-202ENST00000510805 1989 ntBASIC20.08■□□□□ 0.81
IDH3BO43837 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IDH3BO43837 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
IDH3BO43837 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
IDH3BO43837 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
IDH3BO43837 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.08■□□□□ 0.81
IDH3BO43837 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.08■□□□□ 0.81
IDH3BO43837 AC137630.3-201ENST00000607245 391 ntBASIC20.08■□□□□ 0.81
IDH3BO43837 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IDH3BO43837 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IDH3BO43837 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IDH3BO43837 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
IDH3BO43837 AL353803.4-201ENST00000565882 1934 ntBASIC20.08■□□□□ 0.8
IDH3BO43837 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
IDH3BO43837 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
IDH3BO43837 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IDH3BO43837 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IDH3BO43837 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.07■□□□□ 0.8
IDH3BO43837 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.07■□□□□ 0.8
IDH3BO43837 AL033527.3-201ENST00000566366 1196 ntBASIC20.07■□□□□ 0.8
IDH3BO43837 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.07■□□□□ 0.8
IDH3BO43837 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IDH3BO43837 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IDH3BO43837 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IDH3BO43837 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.06■□□□□ 0.8
IDH3BO43837 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.06■□□□□ 0.8
IDH3BO43837 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
IDH3BO43837 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 ECEL1P1-201ENST00000373592 1742 ntBASIC20.06■□□□□ 0.8
IDH3BO43837 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 AC103724.3-201ENST00000564481 992 ntBASIC20.06■□□□□ 0.8
IDH3BO43837 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
IDH3BO43837 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IDH3BO43837 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.06■□□□□ 0.8
IDH3BO43837 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.06■□□□□ 0.8
IDH3BO43837 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.06■□□□□ 0.8
IDH3BO43837 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IDH3BO43837 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IDH3BO43837 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IDH3BO43837 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IDH3BO43837 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms